STRINGSTRING
ABK69653.1 ABK69653.1 sdhB sdhB ABK75821.1 ABK75821.1 sdhC sdhC ABK69964.1 ABK69964.1 sdhA sdhA ABK70077.1 ABK70077.1 ABK71888.1 ABK71888.1 ABK70882.1 ABK70882.1 ABK74971.1 ABK74971.1 ABK75266.1 ABK75266.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK69653.1Conserved hypothetical protein. (32 aa)    
Predicted Functional Partners:
sdhB
Succinate dehydrogenase, iron-sulfur protein; Identified by similarity to SP:P51053; match to protein family HMM TIGR00384.
   
   0.901
ABK75821.1
Succinate dehydrogenase hydrophobic membrane anchor protein SdhD.
   
   0.901
sdhC
Succinate dehydrogenase, cytochrome b556 subunit; Identified by match to protein family HMM PF01127; match to protein family HMM TIGR02970.
   
   0.901
ABK69964.1
Conserved hypothetical protein; May play a role in the intracellular transport of hydrophobic ligands.
  
    0.885
sdhA
Succinate dehydrogenase, flavoprotein subunit; Identified by similarity to SP:P31038; match to protein family HMM PF00890; match to protein family HMM PF02910; match to protein family HMM TIGR01812; match to protein family HMM TIGR01816.
   
   0.803
ABK70077.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.772
ABK71888.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.559
ABK70882.1
SseC protein; Identified by match to protein family HMM PF07210.
  
    0.551
ABK74971.1
Putative thiosulfate sulfurtransferase; May be a sulfotransferase involved in the formation of thiosulfate.
  
    0.454
ABK75266.1
Integral membrane protein.
  
    0.403
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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