Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69918.1 | ABK72985.1 | MSMEG_5817 | MSMEG_0970 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00300. | 0.645 |
| ABK69918.1 | ABK75837.1 | MSMEG_5817 | MSMEG_2766 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.678 |
| ABK69918.1 | ABK76185.1 | MSMEG_5817 | MSMEG_5797 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.639 |
| ABK69918.1 | rbpA | MSMEG_5817 | MSMEG_3858 | Conserved hypothetical protein. | Conserved hypothetical protein; Binds to RNA polymerase (RNAP), probably stimulating transcriptions from principal, but not alternative sigma factor promoters (By similarity). Partially restores transcription in the presence of rifampicin (Rif) in vitro; overexpression leads to an increase in the Rif tolerance in vivo, with smaller colonies. Seems to act by removing Rif from its binding site and preventing its further binding. No longer stimulates transcription in Rif-resistant RNA polymerase (with mutations in rpoB). | 0.750 |
| ABK69918.1 | secG | MSMEG_5817 | MSMEG_3087 | Conserved hypothetical protein. | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.453 |
| ABK72985.1 | ABK69918.1 | MSMEG_0970 | MSMEG_5817 | Identified by match to protein family HMM PF00300. | Conserved hypothetical protein. | 0.645 |
| ABK72985.1 | ABK75837.1 | MSMEG_0970 | MSMEG_2766 | Identified by match to protein family HMM PF00300. | Conserved hypothetical protein. | 0.510 |
| ABK72985.1 | ABK76185.1 | MSMEG_0970 | MSMEG_5797 | Identified by match to protein family HMM PF00300. | Conserved hypothetical protein. | 0.496 |
| ABK72985.1 | rbpA | MSMEG_0970 | MSMEG_3858 | Identified by match to protein family HMM PF00300. | Conserved hypothetical protein; Binds to RNA polymerase (RNAP), probably stimulating transcriptions from principal, but not alternative sigma factor promoters (By similarity). Partially restores transcription in the presence of rifampicin (Rif) in vitro; overexpression leads to an increase in the Rif tolerance in vivo, with smaller colonies. Seems to act by removing Rif from its binding site and preventing its further binding. No longer stimulates transcription in Rif-resistant RNA polymerase (with mutations in rpoB). | 0.699 |
| ABK72985.1 | secG | MSMEG_0970 | MSMEG_3087 | Identified by match to protein family HMM PF00300. | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.597 |
| ABK73614.1 | ABK75995.1 | MSMEG_5795 | MSMEG_5796 | 4-amino-4-deoxychorismate lyase. | Glycine cleavage T-protein (aminomethyl transferase); Identified by match to protein family HMM PF01571; Belongs to the GcvT family. | 0.699 |
| ABK73614.1 | ABK76185.1 | MSMEG_5795 | MSMEG_5797 | 4-amino-4-deoxychorismate lyase. | Conserved hypothetical protein. | 0.485 |
| ABK74039.1 | ABK76185.1 | MSMEG_3483 | MSMEG_5797 | Mosc domain protein; Identified by match to protein family HMM PF03473. | Conserved hypothetical protein. | 0.456 |
| ABK75837.1 | ABK69918.1 | MSMEG_2766 | MSMEG_5817 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.678 |
| ABK75837.1 | ABK72985.1 | MSMEG_2766 | MSMEG_0970 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00300. | 0.510 |
| ABK75837.1 | ABK76185.1 | MSMEG_2766 | MSMEG_5797 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.400 |
| ABK75837.1 | rbpA | MSMEG_2766 | MSMEG_3858 | Conserved hypothetical protein. | Conserved hypothetical protein; Binds to RNA polymerase (RNAP), probably stimulating transcriptions from principal, but not alternative sigma factor promoters (By similarity). Partially restores transcription in the presence of rifampicin (Rif) in vitro; overexpression leads to an increase in the Rif tolerance in vivo, with smaller colonies. Seems to act by removing Rif from its binding site and preventing its further binding. No longer stimulates transcription in Rif-resistant RNA polymerase (with mutations in rpoB). | 0.725 |
| ABK75837.1 | secG | MSMEG_2766 | MSMEG_3087 | Conserved hypothetical protein. | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.668 |
| ABK75995.1 | ABK73614.1 | MSMEG_5796 | MSMEG_5795 | Glycine cleavage T-protein (aminomethyl transferase); Identified by match to protein family HMM PF01571; Belongs to the GcvT family. | 4-amino-4-deoxychorismate lyase. | 0.699 |
| ABK75995.1 | ABK76185.1 | MSMEG_5796 | MSMEG_5797 | Glycine cleavage T-protein (aminomethyl transferase); Identified by match to protein family HMM PF01571; Belongs to the GcvT family. | Conserved hypothetical protein. | 0.570 |
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