Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70103.1 | ABK72561.1 | MSMEG_4757 | MSMEG_4375 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | 3-oxoacyl-[acyl carrier protein] reductase; Identified by match to protein family HMM PF00106. | 0.738 |
| ABK70103.1 | ABK74010.1 | MSMEG_4757 | MSMEG_5802 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106. | 0.738 |
| ABK70103.1 | mdcH | MSMEG_4757 | MSMEG_6629 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | Malonate decarboxylase, epsilon subunit; Identified by match to protein family HMM PF00698; match to protein family HMM TIGR03131. | 0.766 |
| ABK71725.1 | ABK72028.1 | MSMEG_5804 | MSMEG_5805 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.776 |
| ABK71725.1 | ABK72757.1 | MSMEG_5804 | MSMEG_5803 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.778 |
| ABK71725.1 | ABK74010.1 | MSMEG_5804 | MSMEG_5802 | Conserved hypothetical protein. | Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106. | 0.555 |
| ABK72028.1 | ABK71725.1 | MSMEG_5805 | MSMEG_5804 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.776 |
| ABK72028.1 | ABK72757.1 | MSMEG_5805 | MSMEG_5803 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.773 |
| ABK72028.1 | ABK74010.1 | MSMEG_5805 | MSMEG_5802 | Hypothetical protein; Identified by Glimmer2; putative. | Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106. | 0.555 |
| ABK72561.1 | ABK70103.1 | MSMEG_4375 | MSMEG_4757 | 3-oxoacyl-[acyl carrier protein] reductase; Identified by match to protein family HMM PF00106. | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | 0.738 |
| ABK72561.1 | ABK72992.1 | MSMEG_4375 | MSMEG_2872 | 3-oxoacyl-[acyl carrier protein] reductase; Identified by match to protein family HMM PF00106. | Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.458 |
| ABK72561.1 | ABK73722.1 | MSMEG_4375 | MSMEG_2876 | 3-oxoacyl-[acyl carrier protein] reductase; Identified by match to protein family HMM PF00106. | Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.624 |
| ABK72561.1 | ABK74010.1 | MSMEG_4375 | MSMEG_5802 | 3-oxoacyl-[acyl carrier protein] reductase; Identified by match to protein family HMM PF00106. | Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106. | 0.689 |
| ABK72561.1 | mdcH | MSMEG_4375 | MSMEG_6629 | 3-oxoacyl-[acyl carrier protein] reductase; Identified by match to protein family HMM PF00106. | Malonate decarboxylase, epsilon subunit; Identified by match to protein family HMM PF00698; match to protein family HMM TIGR03131. | 0.555 |
| ABK72757.1 | ABK71725.1 | MSMEG_5803 | MSMEG_5804 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.778 |
| ABK72757.1 | ABK72028.1 | MSMEG_5803 | MSMEG_5805 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.773 |
| ABK72757.1 | ABK74010.1 | MSMEG_5803 | MSMEG_5802 | Hypothetical protein; Identified by Glimmer2; putative. | Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106. | 0.554 |
| ABK72992.1 | ABK72561.1 | MSMEG_2872 | MSMEG_4375 | Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 3-oxoacyl-[acyl carrier protein] reductase; Identified by match to protein family HMM PF00106. | 0.458 |
| ABK72992.1 | ABK74010.1 | MSMEG_2872 | MSMEG_5802 | Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106. | 0.642 |
| ABK73521.1 | ABK74010.1 | MSMEG_5711 | MSMEG_5802 | Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106. | 0.606 |
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