Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK72807.1 | ABK73488.1 | MSMEG_5808 | MSMEG_6664 | Binding-protein-dependent transport systems inner membrane component; Identified by match to protein family HMM PF00528. | Methylenetetrahydrofolate reductase family protein, putative; Identified by match to protein family HMM PF02219; Belongs to the methylenetetrahydrofolate reductase family. | 0.472 |
| ABK72807.1 | ABK73784.1 | MSMEG_5808 | MSMEG_5806 | Binding-protein-dependent transport systems inner membrane component; Identified by match to protein family HMM PF00528. | Hypothetical protein; Identified by Glimmer2; putative. | 0.466 |
| ABK72807.1 | ABK73950.1 | MSMEG_5808 | MSMEG_3057 | Binding-protein-dependent transport systems inner membrane component; Identified by match to protein family HMM PF00528. | ABC-type metal ion transport system, permease component; Identified by match to protein family HMM PF00528. | 0.912 |
| ABK72807.1 | ABK74461.1 | MSMEG_5808 | MSMEG_5809 | Binding-protein-dependent transport systems inner membrane component; Identified by match to protein family HMM PF00528. | Lipoprotein YaeC, putative; Identified by match to protein family HMM PF03180. | 0.992 |
| ABK72807.1 | ABK74809.1 | MSMEG_5808 | MSMEG_5810 | Binding-protein-dependent transport systems inner membrane component; Identified by match to protein family HMM PF00528. | Putative monooxygenase. | 0.750 |
| ABK72807.1 | ABK75302.1 | MSMEG_5808 | MSMEG_3058 | Binding-protein-dependent transport systems inner membrane component; Identified by match to protein family HMM PF00528. | Identified by match to protein family HMM PF03180; Belongs to the nlpA lipoprotein family. | 0.996 |
| ABK72807.1 | metK | MSMEG_5808 | MSMEG_3055 | Binding-protein-dependent transport systems inner membrane component; Identified by match to protein family HMM PF00528. | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.430 |
| ABK72807.1 | metN | MSMEG_5808 | MSMEG_3056 | Binding-protein-dependent transport systems inner membrane component; Identified by match to protein family HMM PF00528. | ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.995 |
| ABK72807.1 | metN-2 | MSMEG_5808 | MSMEG_5807 | Binding-protein-dependent transport systems inner membrane component; Identified by match to protein family HMM PF00528. | D-methionine transport ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.998 |
| ABK72807.1 | phnE | MSMEG_5808 | MSMEG_0646 | Binding-protein-dependent transport systems inner membrane component; Identified by match to protein family HMM PF00528. | Putative transporter; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. | 0.487 |
| ABK73488.1 | ABK72807.1 | MSMEG_6664 | MSMEG_5808 | Methylenetetrahydrofolate reductase family protein, putative; Identified by match to protein family HMM PF02219; Belongs to the methylenetetrahydrofolate reductase family. | Binding-protein-dependent transport systems inner membrane component; Identified by match to protein family HMM PF00528. | 0.472 |
| ABK73488.1 | ABK73950.1 | MSMEG_6664 | MSMEG_3057 | Methylenetetrahydrofolate reductase family protein, putative; Identified by match to protein family HMM PF02219; Belongs to the methylenetetrahydrofolate reductase family. | ABC-type metal ion transport system, permease component; Identified by match to protein family HMM PF00528. | 0.480 |
| ABK73488.1 | ABK74461.1 | MSMEG_6664 | MSMEG_5809 | Methylenetetrahydrofolate reductase family protein, putative; Identified by match to protein family HMM PF02219; Belongs to the methylenetetrahydrofolate reductase family. | Lipoprotein YaeC, putative; Identified by match to protein family HMM PF03180. | 0.448 |
| ABK73488.1 | ABK75302.1 | MSMEG_6664 | MSMEG_3058 | Methylenetetrahydrofolate reductase family protein, putative; Identified by match to protein family HMM PF02219; Belongs to the methylenetetrahydrofolate reductase family. | Identified by match to protein family HMM PF03180; Belongs to the nlpA lipoprotein family. | 0.449 |
| ABK73488.1 | metK | MSMEG_6664 | MSMEG_3055 | Methylenetetrahydrofolate reductase family protein, putative; Identified by match to protein family HMM PF02219; Belongs to the methylenetetrahydrofolate reductase family. | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.712 |
| ABK73488.1 | metN | MSMEG_6664 | MSMEG_3056 | Methylenetetrahydrofolate reductase family protein, putative; Identified by match to protein family HMM PF02219; Belongs to the methylenetetrahydrofolate reductase family. | ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.590 |
| ABK73488.1 | metN-2 | MSMEG_6664 | MSMEG_5807 | Methylenetetrahydrofolate reductase family protein, putative; Identified by match to protein family HMM PF02219; Belongs to the methylenetetrahydrofolate reductase family. | D-methionine transport ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.590 |
| ABK73784.1 | ABK72807.1 | MSMEG_5806 | MSMEG_5808 | Hypothetical protein; Identified by Glimmer2; putative. | Binding-protein-dependent transport systems inner membrane component; Identified by match to protein family HMM PF00528. | 0.466 |
| ABK73784.1 | ABK74461.1 | MSMEG_5806 | MSMEG_5809 | Hypothetical protein; Identified by Glimmer2; putative. | Lipoprotein YaeC, putative; Identified by match to protein family HMM PF03180. | 0.445 |
| ABK73784.1 | ABK74809.1 | MSMEG_5806 | MSMEG_5810 | Hypothetical protein; Identified by Glimmer2; putative. | Putative monooxygenase. | 0.442 |
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