Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK72109.1 | ABK74461.1 | MSMEG_1652 | MSMEG_5809 | O-acetylhomoserine sulfhydrylase; Identified by match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM TIGR01326. | Lipoprotein YaeC, putative; Identified by match to protein family HMM PF03180. | 0.672 |
| ABK72109.1 | ABK76067.1 | MSMEG_1652 | MSMEG_0239 | O-acetylhomoserine sulfhydrylase; Identified by match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM TIGR01326. | O-acetylhomoserine/O-acetylserine sulfhydrylase; Identified by match to protein family HMM PF01053; match to protein family HMM TIGR01326. | 0.906 |
| ABK72109.1 | cysNC | MSMEG_1652 | MSMEG_4978 | O-acetylhomoserine sulfhydrylase; Identified by match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM TIGR01326. | Sulfate adenylytransferase, large subunit/adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.618 |
| ABK72109.1 | metH | MSMEG_1652 | MSMEG_4185 | O-acetylhomoserine sulfhydrylase; Identified by match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM TIGR01326. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.953 |
| ABK72807.1 | ABK73950.1 | MSMEG_5808 | MSMEG_3057 | Binding-protein-dependent transport systems inner membrane component; Identified by match to protein family HMM PF00528. | ABC-type metal ion transport system, permease component; Identified by match to protein family HMM PF00528. | 0.912 |
| ABK72807.1 | ABK74461.1 | MSMEG_5808 | MSMEG_5809 | Binding-protein-dependent transport systems inner membrane component; Identified by match to protein family HMM PF00528. | Lipoprotein YaeC, putative; Identified by match to protein family HMM PF03180. | 0.992 |
| ABK72807.1 | ABK74809.1 | MSMEG_5808 | MSMEG_5810 | Binding-protein-dependent transport systems inner membrane component; Identified by match to protein family HMM PF00528. | Putative monooxygenase. | 0.750 |
| ABK72807.1 | metN | MSMEG_5808 | MSMEG_3056 | Binding-protein-dependent transport systems inner membrane component; Identified by match to protein family HMM PF00528. | ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.995 |
| ABK72807.1 | metN-2 | MSMEG_5808 | MSMEG_5807 | Binding-protein-dependent transport systems inner membrane component; Identified by match to protein family HMM PF00528. | D-methionine transport ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.998 |
| ABK72807.1 | phnE | MSMEG_5808 | MSMEG_0646 | Binding-protein-dependent transport systems inner membrane component; Identified by match to protein family HMM PF00528. | Putative transporter; Part of the ABC transporter complex PhnCDE involved in phosphate import. Responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. | 0.487 |
| ABK73950.1 | ABK72807.1 | MSMEG_3057 | MSMEG_5808 | ABC-type metal ion transport system, permease component; Identified by match to protein family HMM PF00528. | Binding-protein-dependent transport systems inner membrane component; Identified by match to protein family HMM PF00528. | 0.912 |
| ABK73950.1 | ABK74461.1 | MSMEG_3057 | MSMEG_5809 | ABC-type metal ion transport system, permease component; Identified by match to protein family HMM PF00528. | Lipoprotein YaeC, putative; Identified by match to protein family HMM PF03180. | 0.974 |
| ABK73950.1 | metN | MSMEG_3057 | MSMEG_3056 | ABC-type metal ion transport system, permease component; Identified by match to protein family HMM PF00528. | ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.998 |
| ABK73950.1 | metN-2 | MSMEG_3057 | MSMEG_5807 | ABC-type metal ion transport system, permease component; Identified by match to protein family HMM PF00528. | D-methionine transport ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.995 |
| ABK74461.1 | ABK72109.1 | MSMEG_5809 | MSMEG_1652 | Lipoprotein YaeC, putative; Identified by match to protein family HMM PF03180. | O-acetylhomoserine sulfhydrylase; Identified by match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM TIGR01326. | 0.672 |
| ABK74461.1 | ABK72807.1 | MSMEG_5809 | MSMEG_5808 | Lipoprotein YaeC, putative; Identified by match to protein family HMM PF03180. | Binding-protein-dependent transport systems inner membrane component; Identified by match to protein family HMM PF00528. | 0.992 |
| ABK74461.1 | ABK73950.1 | MSMEG_5809 | MSMEG_3057 | Lipoprotein YaeC, putative; Identified by match to protein family HMM PF03180. | ABC-type metal ion transport system, permease component; Identified by match to protein family HMM PF00528. | 0.974 |
| ABK74461.1 | ABK74809.1 | MSMEG_5809 | MSMEG_5810 | Lipoprotein YaeC, putative; Identified by match to protein family HMM PF03180. | Putative monooxygenase. | 0.791 |
| ABK74461.1 | ABK76067.1 | MSMEG_5809 | MSMEG_0239 | Lipoprotein YaeC, putative; Identified by match to protein family HMM PF03180. | O-acetylhomoserine/O-acetylserine sulfhydrylase; Identified by match to protein family HMM PF01053; match to protein family HMM TIGR01326. | 0.583 |
| ABK74461.1 | cysNC | MSMEG_5809 | MSMEG_4978 | Lipoprotein YaeC, putative; Identified by match to protein family HMM PF03180. | Sulfate adenylytransferase, large subunit/adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.606 |
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