STRINGSTRING
ABK70207.1 ABK70207.1 ABK71035.1 ABK71035.1 pcaC-5 pcaC-5 ABK73948.1 ABK73948.1 ABK69918.1 ABK69918.1 ABK71522.1 ABK71522.1 ABK70272.1 ABK70272.1 ABK70080.1 ABK70080.1 ABK73417.1 ABK73417.1 ABK71967.1 ABK71967.1 ABK70209.1 ABK70209.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70207.1Conserved hypothetical protein. (421 aa)    
Predicted Functional Partners:
ABK71035.1
Betaine aldehyde dehydrogenase; Identified by match to protein family HMM PF00171.
     
 0.890
pcaC-5
4-carboxymuconolactone decarboxylase domain protein; Identified by match to protein family HMM PF02627.
  
  
 0.887
ABK73948.1
Virulence factor Mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.
   
  
 0.817
ABK69918.1
Conserved hypothetical protein.
   
  
 0.816
ABK71522.1
Hypothetical protein; Identified by Glimmer2; putative.
   
  
 0.816
ABK70272.1
Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243.
      
 0.815
ABK70080.1
Acetyltransferase, gnat family protein, putative; Identified by match to protein family HMM PF00583.
  
    0.708
ABK73417.1
Conserved hypothetical protein; Identified by match to protein family HMM PF06259; Belongs to the WXG100 family.
  
    0.679
ABK71967.1
Aldehyde dehydrogenase (NAD) family protein; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.
   
  
 0.665
ABK70209.1
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.602
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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