STRINGSTRING
ABK71386.1 ABK71386.1 ABK71169.1 ABK71169.1 purC purC ABK72655.1 ABK72655.1 ABK74564.1 ABK74564.1 ABK74255.1 ABK74255.1 ABK75745.1 ABK75745.1 ABK74651.1 ABK74651.1 ABK73397.1 ABK73397.1 ABK73527.1 ABK73527.1 ABK74346.1 ABK74346.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71386.1Conserved hypothetical protein. (207 aa)    
Predicted Functional Partners:
ABK71169.1
Putative membrane acyltransferase; Identified by match to protein family HMM PF01757.
  
    0.643
purC
Phosphoribosylaminoimidazole-succinocarboxamide synthase; Identified by match to protein family HMM PF01259; match to protein family HMM TIGR00081; Belongs to the SAICAR synthetase family.
  
    0.623
ABK72655.1
Protease 2; Identified by match to protein family HMM PF00326; match to protein family HMM PF02897.
  
    0.619
ABK74564.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440; match to protein family HMM PF02909.
  
    0.576
ABK74255.1
Immunogenic protein MPT63.
  
    0.573
ABK75745.1
Conserved hypothetical protein.
  
    0.560
ABK74651.1
Putative membrane protein; Identified by match to protein family HMM PF08044.
  
    0.526
ABK73397.1
Conserved hypothetical protein.
  
     0.512
ABK73527.1
Integral membrane protein.
  
    0.482
ABK74346.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
    0.456
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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