Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK71169.1 | ABK71386.1 | MSMEG_3490 | MSMEG_5842 | Putative membrane acyltransferase; Identified by match to protein family HMM PF01757. | Conserved hypothetical protein. | 0.643 |
ABK71169.1 | ABK73397.1 | MSMEG_3490 | MSMEG_5694 | Putative membrane acyltransferase; Identified by match to protein family HMM PF01757. | Conserved hypothetical protein. | 0.608 |
ABK71169.1 | ABK74255.1 | MSMEG_3490 | MSMEG_5412 | Putative membrane acyltransferase; Identified by match to protein family HMM PF01757. | Immunogenic protein MPT63. | 0.730 |
ABK71169.1 | ABK74564.1 | MSMEG_3490 | MSMEG_2225 | Putative membrane acyltransferase; Identified by match to protein family HMM PF01757. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440; match to protein family HMM PF02909. | 0.442 |
ABK71169.1 | ABK74651.1 | MSMEG_3490 | MSMEG_6902 | Putative membrane acyltransferase; Identified by match to protein family HMM PF01757. | Putative membrane protein; Identified by match to protein family HMM PF08044. | 0.701 |
ABK71386.1 | ABK71169.1 | MSMEG_5842 | MSMEG_3490 | Conserved hypothetical protein. | Putative membrane acyltransferase; Identified by match to protein family HMM PF01757. | 0.643 |
ABK71386.1 | ABK72655.1 | MSMEG_5842 | MSMEG_5839 | Conserved hypothetical protein. | Protease 2; Identified by match to protein family HMM PF00326; match to protein family HMM PF02897. | 0.619 |
ABK71386.1 | ABK73397.1 | MSMEG_5842 | MSMEG_5694 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.512 |
ABK71386.1 | ABK73527.1 | MSMEG_5842 | MSMEG_3838 | Conserved hypothetical protein. | Integral membrane protein. | 0.482 |
ABK71386.1 | ABK74255.1 | MSMEG_5842 | MSMEG_5412 | Conserved hypothetical protein. | Immunogenic protein MPT63. | 0.573 |
ABK71386.1 | ABK74346.1 | MSMEG_5842 | MSMEG_2239 | Conserved hypothetical protein. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.456 |
ABK71386.1 | ABK74564.1 | MSMEG_5842 | MSMEG_2225 | Conserved hypothetical protein. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440; match to protein family HMM PF02909. | 0.576 |
ABK71386.1 | ABK74651.1 | MSMEG_5842 | MSMEG_6902 | Conserved hypothetical protein. | Putative membrane protein; Identified by match to protein family HMM PF08044. | 0.526 |
ABK71386.1 | ABK75745.1 | MSMEG_5842 | MSMEG_5844 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.560 |
ABK71386.1 | purC | MSMEG_5842 | MSMEG_5841 | Conserved hypothetical protein. | Phosphoribosylaminoimidazole-succinocarboxamide synthase; Identified by match to protein family HMM PF01259; match to protein family HMM TIGR00081; Belongs to the SAICAR synthetase family. | 0.623 |
ABK72655.1 | ABK71386.1 | MSMEG_5839 | MSMEG_5842 | Protease 2; Identified by match to protein family HMM PF00326; match to protein family HMM PF02897. | Conserved hypothetical protein. | 0.619 |
ABK72655.1 | ABK75745.1 | MSMEG_5839 | MSMEG_5844 | Protease 2; Identified by match to protein family HMM PF00326; match to protein family HMM PF02897. | Conserved hypothetical protein. | 0.435 |
ABK72655.1 | purC | MSMEG_5839 | MSMEG_5841 | Protease 2; Identified by match to protein family HMM PF00326; match to protein family HMM PF02897. | Phosphoribosylaminoimidazole-succinocarboxamide synthase; Identified by match to protein family HMM PF01259; match to protein family HMM TIGR00081; Belongs to the SAICAR synthetase family. | 0.896 |
ABK73397.1 | ABK71169.1 | MSMEG_5694 | MSMEG_3490 | Conserved hypothetical protein. | Putative membrane acyltransferase; Identified by match to protein family HMM PF01757. | 0.608 |
ABK73397.1 | ABK71386.1 | MSMEG_5694 | MSMEG_5842 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.512 |
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