Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70205.1 | ABK74343.1 | MSMEG_6735 | MSMEG_3576 | Amino acid permease, putative; Identified by match to protein family HMM PF00324. | Alpha-amylase 3; Identified by match to protein family HMM PF00128. | 0.660 |
| ABK70205.1 | ABK74424.1 | MSMEG_6735 | MSMEG_4696 | Amino acid permease, putative; Identified by match to protein family HMM PF00324. | Identified by match to protein family HMM PF00128. | 0.659 |
| ABK70205.1 | ABK74465.1 | MSMEG_6735 | MSMEG_5848 | Amino acid permease, putative; Identified by match to protein family HMM PF00324. | Amino acid permease-associated region; Identified by match to protein family HMM PF00324. | 0.632 |
| ABK70205.1 | glgE | MSMEG_6735 | MSMEG_4916 | Amino acid permease, putative; Identified by match to protein family HMM PF00324. | Alpha-amylase family protein; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is also able to catalyze the reverse reaction in vitro. Cannot use glucose 1-phosphate as substrate. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | 0.660 |
| ABK70205.1 | treS | MSMEG_6735 | MSMEG_6515 | Amino acid permease, putative; Identified by match to protein family HMM PF00324. | Trehalose synthase; Catalyzes the reversible interconversion of maltose and trehalose by transglucosylation. Maltose is the preferred substrate. To a lesser extent, also displays amylase activity, catalyzing the endohydrolysis of (1->4)-alpha-D- glucosidic linkages in glycogen and maltooligosaccharides such as maltoheptaose, to produce maltose which then can be converted to trehalose. TreS plays a key role in the utilization of trehalose for the production of glycogen and alpha-glucan via the TreS-Pep2 branch involved in the biosynthesis of maltose-1-phosphate (M1P). Might also functio [...] | 0.660 |
| ABK70307.1 | ABK71805.1 | MSMEG_5851 | MSMEG_5850 | Putative esterase superfamily protein; Identified by match to protein family HMM PF00756. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.657 |
| ABK70307.1 | ABK74465.1 | MSMEG_5851 | MSMEG_5848 | Putative esterase superfamily protein; Identified by match to protein family HMM PF00756. | Amino acid permease-associated region; Identified by match to protein family HMM PF00324. | 0.569 |
| ABK71136.1 | ABK74343.1 | MSMEG_4377 | MSMEG_3576 | Amino acid permease family protein, putative; Identified by match to protein family HMM PF00324. | Alpha-amylase 3; Identified by match to protein family HMM PF00128. | 0.655 |
| ABK71136.1 | ABK74424.1 | MSMEG_4377 | MSMEG_4696 | Amino acid permease family protein, putative; Identified by match to protein family HMM PF00324. | Identified by match to protein family HMM PF00128. | 0.662 |
| ABK71136.1 | ABK74465.1 | MSMEG_4377 | MSMEG_5848 | Amino acid permease family protein, putative; Identified by match to protein family HMM PF00324. | Amino acid permease-associated region; Identified by match to protein family HMM PF00324. | 0.536 |
| ABK71136.1 | glgE | MSMEG_4377 | MSMEG_4916 | Amino acid permease family protein, putative; Identified by match to protein family HMM PF00324. | Alpha-amylase family protein; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is also able to catalyze the reverse reaction in vitro. Cannot use glucose 1-phosphate as substrate. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | 0.659 |
| ABK71136.1 | treS | MSMEG_4377 | MSMEG_6515 | Amino acid permease family protein, putative; Identified by match to protein family HMM PF00324. | Trehalose synthase; Catalyzes the reversible interconversion of maltose and trehalose by transglucosylation. Maltose is the preferred substrate. To a lesser extent, also displays amylase activity, catalyzing the endohydrolysis of (1->4)-alpha-D- glucosidic linkages in glycogen and maltooligosaccharides such as maltoheptaose, to produce maltose which then can be converted to trehalose. TreS plays a key role in the utilization of trehalose for the production of glycogen and alpha-glucan via the TreS-Pep2 branch involved in the biosynthesis of maltose-1-phosphate (M1P). Might also functio [...] | 0.660 |
| ABK71805.1 | ABK70307.1 | MSMEG_5850 | MSMEG_5851 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | Putative esterase superfamily protein; Identified by match to protein family HMM PF00756. | 0.657 |
| ABK71805.1 | ABK74465.1 | MSMEG_5850 | MSMEG_5848 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | Amino acid permease-associated region; Identified by match to protein family HMM PF00324. | 0.799 |
| ABK74343.1 | ABK70205.1 | MSMEG_3576 | MSMEG_6735 | Alpha-amylase 3; Identified by match to protein family HMM PF00128. | Amino acid permease, putative; Identified by match to protein family HMM PF00324. | 0.660 |
| ABK74343.1 | ABK71136.1 | MSMEG_3576 | MSMEG_4377 | Alpha-amylase 3; Identified by match to protein family HMM PF00128. | Amino acid permease family protein, putative; Identified by match to protein family HMM PF00324. | 0.655 |
| ABK74343.1 | ABK74424.1 | MSMEG_3576 | MSMEG_4696 | Alpha-amylase 3; Identified by match to protein family HMM PF00128. | Identified by match to protein family HMM PF00128. | 0.934 |
| ABK74343.1 | ABK74465.1 | MSMEG_3576 | MSMEG_5848 | Alpha-amylase 3; Identified by match to protein family HMM PF00128. | Amino acid permease-associated region; Identified by match to protein family HMM PF00324. | 0.662 |
| ABK74343.1 | ABK75740.1 | MSMEG_3576 | MSMEG_1069 | Alpha-amylase 3; Identified by match to protein family HMM PF00128. | Amino acid permease-associated region; Identified by match to protein family HMM PF00324. | 0.660 |
| ABK74343.1 | glgE | MSMEG_3576 | MSMEG_4916 | Alpha-amylase 3; Identified by match to protein family HMM PF00128. | Alpha-amylase family protein; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is also able to catalyze the reverse reaction in vitro. Cannot use glucose 1-phosphate as substrate. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | 0.611 |
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