STRINGSTRING
ABK71225.1 ABK71225.1 ABK74503.1 ABK74503.1 ABK73925.1 ABK73925.1 ksdD ksdD ABK70837.1 ABK70837.1 ABK72635.1 ABK72635.1 ABK70902.1 ABK70902.1 ABK71760.1 ABK71760.1 ABK71264.1 ABK71264.1 ABK70663.1 ABK70663.1 ABK72447.1 ABK72447.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71225.1Nuclear transport factor 2 (NTF2) domain superfamily protein; Identified by match to protein family HMM PF02136. (145 aa)    
Predicted Functional Partners:
ABK74503.1
Succinate dehydrogenase; Identified by match to protein family HMM PF00890; match to protein family HMM PF01266.
 
 
 0.945
ABK73925.1
Steroid delta-isomerase; Identified by match to protein family HMM PF02136.
 
 
 0.942
ksdD
3-ketosteroid dehydrogenase; Catalyzes the elimination of the C-1 and C-2 hydrogen atoms of the A-ring from the polycyclic ring structure of 3-ketosteroids. Is also involved in the formation of 1,4-androstadiene-3,17-dione (ADD) from 4-androstene-3,17-dione (AD) to.
 
  
 0.941
ABK70837.1
3-ketosteroid dehydrogenase; Identified by match to protein family HMM PF00890.
 
 
 0.936
ABK72635.1
3-ketosteroid dehydrogenase; Identified by match to protein family HMM PF00890.
  
 
  0.930
ABK70902.1
3-ketosteroid-delta-1-dehydrogenase; Identified by match to protein family HMM PF00890; match to protein family HMM PF01266.
 
 
 0.930
ABK71760.1
3-ketosteroid-delta4; Identified by match to protein family HMM PF00890; match to protein family HMM PF01266.
 
 
 0.930
ABK71264.1
Hypothetical protein; Identified by Glimmer2; putative.
   
 
  0.901
ABK70663.1
Putative short chain dehydrogenase; Identified by match to protein family HMM PF00106.
 
     0.872
ABK72447.1
Conserved hypothetical protein.
 
    0.853
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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