STRINGSTRING
ABK71396.1 ABK71396.1 ABK71622.1 ABK71622.1 ABK70566.1 ABK70566.1 ABK75593.1 ABK75593.1 ABK75029.1 ABK75029.1 ABK73638.1 ABK73638.1 ABK73721.1 ABK73721.1 ABK73186.1 ABK73186.1 ABK75469.1 ABK75469.1 ABK72264.1 ABK72264.1 ABK69790.1 ABK69790.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71396.1acyl-CoA synthase; Identified by match to protein family HMM PF00501. (514 aa)    
Predicted Functional Partners:
ABK71622.1
Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771.
 
  
 0.944
ABK70566.1
acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF08028.
 
  
 0.929
ABK75593.1
Medium chain acyl-CoA synthetase; Identified by match to protein family HMM PF00501.
  
  
 0.844
ABK75029.1
Medium chain acyl-CoA synthetase; Identified by match to protein family HMM PF00501.
  
  
 0.842
ABK73638.1
Oxidoreductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF05368; match to protein family HMM PF07993.
  
 
 0.818
ABK73721.1
AraC family protein transcriptional regulator.
  
    0.791
ABK73186.1
AMP-binding enzyme; Identified by match to protein family HMM PF00501.
  
  
 0.761
ABK75469.1
acetyl-CoA acetyltransferase.
 
 
 0.752
ABK72264.1
Conserved domain protein.
 
    0.744
ABK69790.1
Lipid-transfer protein.
 
 
 0.743
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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