Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69750.1 | ABK75944.1 | MSMEG_2647 | MSMEG_5910 | Metallophosphoesterase; Identified by match to protein family HMM PF00149. | Quinone binding protein; Identified by match to protein family HMM PF00903. | 0.435 |
ABK73282.1 | ABK75944.1 | MSMEG_2181 | MSMEG_5910 | Cell filamentation protein; Identified by match to protein family HMM PF02661. | Quinone binding protein; Identified by match to protein family HMM PF00903. | 0.415 |
ABK73635.1 | ABK75944.1 | MSMEG_6549 | MSMEG_5910 | Conserved hypothetical protein. | Quinone binding protein; Identified by match to protein family HMM PF00903. | 0.439 |
ABK73721.1 | ABK75944.1 | MSMEG_5911 | MSMEG_5910 | AraC family protein transcriptional regulator. | Quinone binding protein; Identified by match to protein family HMM PF00903. | 0.650 |
ABK75944.1 | ABK69750.1 | MSMEG_5910 | MSMEG_2647 | Quinone binding protein; Identified by match to protein family HMM PF00903. | Metallophosphoesterase; Identified by match to protein family HMM PF00149. | 0.435 |
ABK75944.1 | ABK73282.1 | MSMEG_5910 | MSMEG_2181 | Quinone binding protein; Identified by match to protein family HMM PF00903. | Cell filamentation protein; Identified by match to protein family HMM PF02661. | 0.415 |
ABK75944.1 | ABK73635.1 | MSMEG_5910 | MSMEG_6549 | Quinone binding protein; Identified by match to protein family HMM PF00903. | Conserved hypothetical protein. | 0.439 |
ABK75944.1 | ABK73721.1 | MSMEG_5910 | MSMEG_5911 | Quinone binding protein; Identified by match to protein family HMM PF00903. | AraC family protein transcriptional regulator. | 0.650 |
ABK75944.1 | cobB-2 | MSMEG_5910 | MSMEG_4620 | Quinone binding protein; Identified by match to protein family HMM PF00903. | NAD-dependent deacetylase 1; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily. | 0.400 |
ABK75944.1 | gabD2 | MSMEG_5910 | MSMEG_5912 | Quinone binding protein; Identified by match to protein family HMM PF00903. | Succinic semialdehyde dehydrogenase; Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. Although it has succinate semialdehyde dehydrogenase activity, is likely to act physiologically on a different aldehyde(s) (By similarity). | 0.548 |
cobB-2 | ABK75944.1 | MSMEG_4620 | MSMEG_5910 | NAD-dependent deacetylase 1; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily. | Quinone binding protein; Identified by match to protein family HMM PF00903. | 0.400 |
gabD2 | ABK75944.1 | MSMEG_5912 | MSMEG_5910 | Succinic semialdehyde dehydrogenase; Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. Although it has succinate semialdehyde dehydrogenase activity, is likely to act physiologically on a different aldehyde(s) (By similarity). | Quinone binding protein; Identified by match to protein family HMM PF00903. | 0.548 |