STRINGSTRING
ABK75944.1 ABK75944.1 ABK73721.1 ABK73721.1 gabD2 gabD2 ABK73635.1 ABK73635.1 ABK69750.1 ABK69750.1 ABK73282.1 ABK73282.1 cobB-2 cobB-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK75944.1Quinone binding protein; Identified by match to protein family HMM PF00903. (131 aa)    
Predicted Functional Partners:
ABK73721.1
AraC family protein transcriptional regulator.
 
    0.650
gabD2
Succinic semialdehyde dehydrogenase; Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. Although it has succinate semialdehyde dehydrogenase activity, is likely to act physiologically on a different aldehyde(s) (By similarity).
  
    0.548
ABK73635.1
Conserved hypothetical protein.
  
    0.439
ABK69750.1
Metallophosphoesterase; Identified by match to protein family HMM PF00149.
 
    0.435
ABK73282.1
Cell filamentation protein; Identified by match to protein family HMM PF02661.
   
  
 0.415
cobB-2
NAD-dependent deacetylase 1; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
  
    0.400
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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