Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69790.1 | ABK70906.1 | MSMEG_5922 | MSMEG_5915 | Lipid-transfer protein. | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | 0.965 |
| ABK69790.1 | ABK72460.1 | MSMEG_5922 | MSMEG_5921 | Lipid-transfer protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF01796. | 0.994 |
| ABK69790.1 | ABK72517.1 | MSMEG_5922 | MSMEG_5920 | Lipid-transfer protein. | FMN-dependent monooxygenase; Identified by match to protein family HMM PF00296. | 0.885 |
| ABK69790.1 | ABK72557.1 | MSMEG_5922 | MSMEG_5917 | Lipid-transfer protein. | Conserved hypothetical protein. | 0.594 |
| ABK69790.1 | ABK72664.1 | MSMEG_5922 | MSMEG_5919 | Lipid-transfer protein. | Conserved hypothetical protein. | 0.804 |
| ABK69790.1 | ABK74402.1 | MSMEG_5922 | MSMEG_5914 | Lipid-transfer protein. | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | 0.896 |
| ABK69790.1 | ABK75469.1 | MSMEG_5922 | MSMEG_5923 | Lipid-transfer protein. | acetyl-CoA acetyltransferase. | 0.961 |
| ABK69790.1 | ABK75580.1 | MSMEG_5922 | MSMEG_5996 | Lipid-transfer protein. | acetyl-CoA acetyltransferase; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family. | 0.806 |
| ABK69790.1 | cyp142 | MSMEG_5922 | MSMEG_5918 | Lipid-transfer protein. | P450 heme-thiolate protein; Involved in the utilization of cholesterol as the sole carbon and energy source by degrading the side chain. Primarily catalyzes the sequential oxidation of the terminal methyl of cholest-4-en-3-one into (25R)-26-hydroxycholest-4-en-3-one (alcohol), (25R)-26-oxocholest-4-en- 3-one (aldehyde), to finally yield the carboxylic acid (25R)-3- oxocholest-4-en-26-oate. Also able to sequentially oxidize cholesterol itself, not only cholest-4-en-3-one. | 0.722 |
| ABK70906.1 | ABK69790.1 | MSMEG_5915 | MSMEG_5922 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | Lipid-transfer protein. | 0.965 |
| ABK70906.1 | ABK72460.1 | MSMEG_5915 | MSMEG_5921 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | Conserved hypothetical protein; Identified by match to protein family HMM PF01796. | 0.953 |
| ABK70906.1 | ABK72517.1 | MSMEG_5915 | MSMEG_5920 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | FMN-dependent monooxygenase; Identified by match to protein family HMM PF00296. | 0.856 |
| ABK70906.1 | ABK72557.1 | MSMEG_5915 | MSMEG_5917 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | Conserved hypothetical protein. | 0.819 |
| ABK70906.1 | ABK72664.1 | MSMEG_5915 | MSMEG_5919 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | Conserved hypothetical protein. | 0.823 |
| ABK70906.1 | ABK74402.1 | MSMEG_5915 | MSMEG_5914 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | 0.940 |
| ABK70906.1 | ABK75469.1 | MSMEG_5915 | MSMEG_5923 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | acetyl-CoA acetyltransferase. | 0.978 |
| ABK70906.1 | ABK75580.1 | MSMEG_5915 | MSMEG_5996 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | acetyl-CoA acetyltransferase; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family. | 0.962 |
| ABK70906.1 | cyp142 | MSMEG_5915 | MSMEG_5918 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | P450 heme-thiolate protein; Involved in the utilization of cholesterol as the sole carbon and energy source by degrading the side chain. Primarily catalyzes the sequential oxidation of the terminal methyl of cholest-4-en-3-one into (25R)-26-hydroxycholest-4-en-3-one (alcohol), (25R)-26-oxocholest-4-en- 3-one (aldehyde), to finally yield the carboxylic acid (25R)-3- oxocholest-4-en-26-oate. Also able to sequentially oxidize cholesterol itself, not only cholest-4-en-3-one. | 0.469 |
| ABK72460.1 | ABK69790.1 | MSMEG_5921 | MSMEG_5922 | Conserved hypothetical protein; Identified by match to protein family HMM PF01796. | Lipid-transfer protein. | 0.994 |
| ABK72460.1 | ABK70906.1 | MSMEG_5921 | MSMEG_5915 | Conserved hypothetical protein; Identified by match to protein family HMM PF01796. | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | 0.953 |
page 1 of 5