Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69790.1 | ABK70906.1 | MSMEG_5922 | MSMEG_5915 | Lipid-transfer protein. | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | 0.965 |
ABK69790.1 | ABK72460.1 | MSMEG_5922 | MSMEG_5921 | Lipid-transfer protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF01796. | 0.994 |
ABK69790.1 | ABK72517.1 | MSMEG_5922 | MSMEG_5920 | Lipid-transfer protein. | FMN-dependent monooxygenase; Identified by match to protein family HMM PF00296. | 0.885 |
ABK69790.1 | ABK72664.1 | MSMEG_5922 | MSMEG_5919 | Lipid-transfer protein. | Conserved hypothetical protein. | 0.804 |
ABK69790.1 | ABK73497.1 | MSMEG_5922 | MSMEG_5991 | Lipid-transfer protein. | MaoC like domain, putative; Identified by match to protein family HMM PF01575. | 0.935 |
ABK69790.1 | ABK73563.1 | MSMEG_5922 | MSMEG_5993 | Lipid-transfer protein. | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771. | 0.974 |
ABK69790.1 | ABK74402.1 | MSMEG_5922 | MSMEG_5914 | Lipid-transfer protein. | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | 0.896 |
ABK69790.1 | ABK74714.1 | MSMEG_5922 | MSMEG_5990 | Lipid-transfer protein. | Lipid-transfer protein. | 0.866 |
ABK69790.1 | ABK75469.1 | MSMEG_5922 | MSMEG_5923 | Lipid-transfer protein. | acetyl-CoA acetyltransferase. | 0.961 |
ABK69790.1 | ABK75580.1 | MSMEG_5922 | MSMEG_5996 | Lipid-transfer protein. | acetyl-CoA acetyltransferase; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family. | 0.806 |
ABK70906.1 | ABK69790.1 | MSMEG_5915 | MSMEG_5922 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | Lipid-transfer protein. | 0.965 |
ABK70906.1 | ABK72460.1 | MSMEG_5915 | MSMEG_5921 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | Conserved hypothetical protein; Identified by match to protein family HMM PF01796. | 0.953 |
ABK70906.1 | ABK72517.1 | MSMEG_5915 | MSMEG_5920 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | FMN-dependent monooxygenase; Identified by match to protein family HMM PF00296. | 0.856 |
ABK70906.1 | ABK72664.1 | MSMEG_5915 | MSMEG_5919 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | Conserved hypothetical protein. | 0.823 |
ABK70906.1 | ABK73497.1 | MSMEG_5915 | MSMEG_5991 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | MaoC like domain, putative; Identified by match to protein family HMM PF01575. | 0.833 |
ABK70906.1 | ABK73563.1 | MSMEG_5915 | MSMEG_5993 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771. | 0.861 |
ABK70906.1 | ABK74402.1 | MSMEG_5915 | MSMEG_5914 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | 0.940 |
ABK70906.1 | ABK74714.1 | MSMEG_5915 | MSMEG_5990 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | Lipid-transfer protein. | 0.897 |
ABK70906.1 | ABK75469.1 | MSMEG_5915 | MSMEG_5923 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | acetyl-CoA acetyltransferase. | 0.978 |
ABK70906.1 | ABK75580.1 | MSMEG_5915 | MSMEG_5996 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | acetyl-CoA acetyltransferase; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family. | 0.962 |
page 1 of 6