STRINGSTRING
ABK71574.1 ABK71574.1 ABK72337.1 ABK72337.1 ABK71077.1 ABK71077.1 ABK74785.1 ABK74785.1 ABK72168.1 ABK72168.1 ABK70833.1 ABK70833.1 ABK71749.1 ABK71749.1 ABK75235.1 ABK75235.1 ABK75340.1 ABK75340.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71574.1Putative secreted protein. (497 aa)    
Predicted Functional Partners:
ABK72337.1
Conserved hypothetical protein.
 
    0.940
ABK71077.1
Conserved hypothetical protein.
 
    0.914
ABK74785.1
Identified by match to protein family HMM PF00903.
 
    0.686
ABK72168.1
Cobalt transport protein CbiM.
  
    0.496
ABK70833.1
Regulatory protein, putative; Identified by match to protein family HMM PF07905.
  
    0.466
ABK71749.1
Conserved hypothetical protein; Identified by match to protein family HMM PF05908.
  
    0.451
ABK75235.1
Conserved hypothetical protein.
  
    0.445
ABK75340.1
Conserved hypothetical protein; Identified by match to protein family HMM PF03706; match to protein family HMM TIGR00374.
  
     0.400
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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