Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70833.1 | ABK71077.1 | MSMEG_3975 | MSMEG_5929 | Regulatory protein, putative; Identified by match to protein family HMM PF07905. | Conserved hypothetical protein. | 0.428 |
ABK70833.1 | ABK71574.1 | MSMEG_3975 | MSMEG_5926 | Regulatory protein, putative; Identified by match to protein family HMM PF07905. | Putative secreted protein. | 0.466 |
ABK70833.1 | ABK74785.1 | MSMEG_3975 | MSMEG_6630 | Regulatory protein, putative; Identified by match to protein family HMM PF07905. | Identified by match to protein family HMM PF00903. | 0.424 |
ABK71077.1 | ABK70833.1 | MSMEG_5929 | MSMEG_3975 | Conserved hypothetical protein. | Regulatory protein, putative; Identified by match to protein family HMM PF07905. | 0.428 |
ABK71077.1 | ABK71574.1 | MSMEG_5929 | MSMEG_5926 | Conserved hypothetical protein. | Putative secreted protein. | 0.914 |
ABK71077.1 | ABK72168.1 | MSMEG_5929 | MSMEG_2608 | Conserved hypothetical protein. | Cobalt transport protein CbiM. | 0.401 |
ABK71077.1 | ABK72337.1 | MSMEG_5929 | MSMEG_5928 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.993 |
ABK71077.1 | ABK74785.1 | MSMEG_5929 | MSMEG_6630 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00903. | 0.607 |
ABK71574.1 | ABK70833.1 | MSMEG_5926 | MSMEG_3975 | Putative secreted protein. | Regulatory protein, putative; Identified by match to protein family HMM PF07905. | 0.466 |
ABK71574.1 | ABK71077.1 | MSMEG_5926 | MSMEG_5929 | Putative secreted protein. | Conserved hypothetical protein. | 0.914 |
ABK71574.1 | ABK71749.1 | MSMEG_5926 | MSMEG_5591 | Putative secreted protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF05908. | 0.451 |
ABK71574.1 | ABK72168.1 | MSMEG_5926 | MSMEG_2608 | Putative secreted protein. | Cobalt transport protein CbiM. | 0.496 |
ABK71574.1 | ABK72337.1 | MSMEG_5926 | MSMEG_5928 | Putative secreted protein. | Conserved hypothetical protein. | 0.940 |
ABK71574.1 | ABK74785.1 | MSMEG_5926 | MSMEG_6630 | Putative secreted protein. | Identified by match to protein family HMM PF00903. | 0.686 |
ABK71574.1 | ABK75235.1 | MSMEG_5926 | MSMEG_3804 | Putative secreted protein. | Conserved hypothetical protein. | 0.445 |
ABK71574.1 | ABK75340.1 | MSMEG_5926 | MSMEG_1199 | Putative secreted protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF03706; match to protein family HMM TIGR00374. | 0.400 |
ABK71749.1 | ABK71574.1 | MSMEG_5591 | MSMEG_5926 | Conserved hypothetical protein; Identified by match to protein family HMM PF05908. | Putative secreted protein. | 0.451 |
ABK71749.1 | ABK74785.1 | MSMEG_5591 | MSMEG_6630 | Conserved hypothetical protein; Identified by match to protein family HMM PF05908. | Identified by match to protein family HMM PF00903. | 0.467 |
ABK71749.1 | ABK75340.1 | MSMEG_5591 | MSMEG_1199 | Conserved hypothetical protein; Identified by match to protein family HMM PF05908. | Conserved hypothetical protein; Identified by match to protein family HMM PF03706; match to protein family HMM TIGR00374. | 0.517 |
ABK72168.1 | ABK71077.1 | MSMEG_2608 | MSMEG_5929 | Cobalt transport protein CbiM. | Conserved hypothetical protein. | 0.401 |
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