STRINGSTRING
ABK71313.1 ABK71313.1 ABK70103.1 ABK70103.1 ABK75571.1 ABK75571.1 ABK72267.1 ABK72267.1 cysE cysE ABK74667.1 ABK74667.1 ABK73417.1 ABK73417.1 ABK69574.1 ABK69574.1 ABK69763.1 ABK69763.1 ABK73937.1 ABK73937.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71313.1Conserved hypothetical protein; Identified by match to protein family HMM PF02698. (192 aa)    
Predicted Functional Partners:
ABK70103.1
Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801.
  
  
 0.698
ABK75571.1
Glucose-methanol-choline oxidoreductase; Identified by match to protein family HMM PF00732; match to protein family HMM PF01266.
  
    0.663
ABK72267.1
Conserved hypothetical protein.
 
    0.557
cysE
Serine O-acetyltransferase.
  
    0.525
ABK74667.1
AMP-dependent synthetase and ligase; Identified by match to protein family HMM PF00501.
  
    0.433
ABK73417.1
Conserved hypothetical protein; Identified by match to protein family HMM PF06259; Belongs to the WXG100 family.
  
     0.422
ABK69574.1
Efflux membrane protein; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily.
 
    0.418
ABK69763.1
Identified by match to protein family HMM PF01636.
 
    0.408
ABK73937.1
Putative transcriptional regulator; Identified by match to protein family HMM PF00196; match to protein family HMM PF07721.
  
    0.406
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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