Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69989.1 | ABK70977.1 | MSMEG_5958 | MSMEG_5960 | Hypothetical protein; Identified by Glimmer2; putative. | O-antigen polymerase, putative; Identified by match to protein family HMM PF04932. | 0.887 |
| ABK69989.1 | ABK72045.1 | MSMEG_5958 | MSMEG_5968 | Hypothetical protein; Identified by Glimmer2; putative. | Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01943. | 0.412 |
| ABK69989.1 | ABK72242.1 | MSMEG_5958 | MSMEG_5963 | Hypothetical protein; Identified by Glimmer2; putative. | Glycosyl transferase, family protein 2; Identified by match to protein family HMM PF00535. | 0.609 |
| ABK69989.1 | ABK73693.1 | MSMEG_5958 | MSMEG_5068 | Hypothetical protein; Identified by Glimmer2; putative. | Mrp protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.660 |
| ABK69989.1 | ABK74440.1 | MSMEG_5958 | MSMEG_5984 | Hypothetical protein; Identified by Glimmer2; putative. | Undecaprenyl-phosphate galactosephosphotransferase; Identified by match to protein family HMM PF02397; match to protein family HMM TIGR03025. | 0.547 |
| ABK69989.1 | ABK75031.1 | MSMEG_5958 | MSMEG_6684 | Hypothetical protein; Identified by Glimmer2; putative. | Agarase. | 0.447 |
| ABK69989.1 | ABK75281.1 | MSMEG_5958 | MSMEG_5761 | Hypothetical protein; Identified by Glimmer2; putative. | Cupin domain protein; Identified by match to protein family HMM PF07883. | 0.419 |
| ABK69989.1 | algD | MSMEG_5958 | MSMEG_5957 | Hypothetical protein; Identified by Glimmer2; putative. | GDP-mannose 6-dehydrogenase AlgD; Identified by similarity to SP:O07299; match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026. | 0.425 |
| ABK70977.1 | ABK69989.1 | MSMEG_5960 | MSMEG_5958 | O-antigen polymerase, putative; Identified by match to protein family HMM PF04932. | Hypothetical protein; Identified by Glimmer2; putative. | 0.887 |
| ABK70977.1 | ABK72045.1 | MSMEG_5960 | MSMEG_5968 | O-antigen polymerase, putative; Identified by match to protein family HMM PF04932. | Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01943. | 0.724 |
| ABK70977.1 | ABK72242.1 | MSMEG_5960 | MSMEG_5963 | O-antigen polymerase, putative; Identified by match to protein family HMM PF04932. | Glycosyl transferase, family protein 2; Identified by match to protein family HMM PF00535. | 0.782 |
| ABK70977.1 | ABK74440.1 | MSMEG_5960 | MSMEG_5984 | O-antigen polymerase, putative; Identified by match to protein family HMM PF04932. | Undecaprenyl-phosphate galactosephosphotransferase; Identified by match to protein family HMM PF02397; match to protein family HMM TIGR03025. | 0.746 |
| ABK70977.1 | ABK75281.1 | MSMEG_5960 | MSMEG_5761 | O-antigen polymerase, putative; Identified by match to protein family HMM PF04932. | Cupin domain protein; Identified by match to protein family HMM PF07883. | 0.419 |
| ABK70977.1 | algD | MSMEG_5960 | MSMEG_5957 | O-antigen polymerase, putative; Identified by match to protein family HMM PF04932. | GDP-mannose 6-dehydrogenase AlgD; Identified by similarity to SP:O07299; match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026. | 0.549 |
| ABK72045.1 | ABK69989.1 | MSMEG_5968 | MSMEG_5958 | Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01943. | Hypothetical protein; Identified by Glimmer2; putative. | 0.412 |
| ABK72045.1 | ABK70977.1 | MSMEG_5968 | MSMEG_5960 | Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01943. | O-antigen polymerase, putative; Identified by match to protein family HMM PF04932. | 0.724 |
| ABK72045.1 | ABK72242.1 | MSMEG_5968 | MSMEG_5963 | Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01943. | Glycosyl transferase, family protein 2; Identified by match to protein family HMM PF00535. | 0.560 |
| ABK72045.1 | ABK74440.1 | MSMEG_5968 | MSMEG_5984 | Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01943. | Undecaprenyl-phosphate galactosephosphotransferase; Identified by match to protein family HMM PF02397; match to protein family HMM TIGR03025. | 0.774 |
| ABK72045.1 | algD | MSMEG_5968 | MSMEG_5957 | Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01943. | GDP-mannose 6-dehydrogenase AlgD; Identified by similarity to SP:O07299; match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026. | 0.678 |
| ABK72242.1 | ABK69989.1 | MSMEG_5963 | MSMEG_5958 | Glycosyl transferase, family protein 2; Identified by match to protein family HMM PF00535. | Hypothetical protein; Identified by Glimmer2; putative. | 0.609 |
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