STRINGSTRING
cyp125 cyp125 ABK72398.1 ABK72398.1 ABK75676.1 ABK75676.1 cyp142 cyp142 ABK71566.1 ABK71566.1 ABK74355.1 ABK74355.1 ABK73207.1 ABK73207.1 ABK70448.1 ABK70448.1 ABK73563.1 ABK73563.1 ABK73497.1 ABK73497.1 ABK74193.1 ABK74193.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
cyp125P450 heme-thiolate protein; Involved in the utilization of cholesterol as the sole carbon and energy source by degrading the side chain. Primarily catalyzes the sequential oxidation of the terminal methyl of cholest-4-en-3-one into (25S)-26-hydroxycholest-4-en-3-one (alcohol), (25S)-26-oxocholest-4-en- 3-one (aldehyde), to finally yield the carboxylic acid (25S)-3- oxocholest-4-en-26-oate. Also able to sequentially oxidize cholesterol itself, not only cholest-4-en-3-one. (427 aa)    
Predicted Functional Partners:
ABK72398.1
Amino acid adenylation; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF00975; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733.
  
 0.950
ABK75676.1
FAD dependent oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01266.
  
 
 0.945
cyp142
P450 heme-thiolate protein; Involved in the utilization of cholesterol as the sole carbon and energy source by degrading the side chain. Primarily catalyzes the sequential oxidation of the terminal methyl of cholest-4-en-3-one into (25R)-26-hydroxycholest-4-en-3-one (alcohol), (25R)-26-oxocholest-4-en- 3-one (aldehyde), to finally yield the carboxylic acid (25R)-3- oxocholest-4-en-26-oate. Also able to sequentially oxidize cholesterol itself, not only cholest-4-en-3-one.
  
 
0.942
ABK71566.1
3-beta hydroxysteroid dehydrogenase/isomerase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.
  
 0.937
ABK74355.1
Linalool 8-monooxygenase; Belongs to the cytochrome P450 family.
  
 
0.904
ABK73207.1
Cytochrome P450; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family.
  
 
 
0.904
ABK70448.1
Conserved hypothetical protein; Identified by match to protein family HMM PF01796.
 
  
 0.900
ABK73563.1
Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771.
 
 
 0.898
ABK73497.1
MaoC like domain, putative; Identified by match to protein family HMM PF01575.
 
  
 0.896
ABK74193.1
Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF08028.
 
 
 0.876
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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