Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69578.1 | ABK70424.1 | MSMEG_6010 | MSMEG_6000 | Hypothetical protein; Identified by Glimmer2; putative. | Short chain dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. | 0.819 |
| ABK69578.1 | ABK71994.1 | MSMEG_6010 | MSMEG_6012 | Hypothetical protein; Identified by Glimmer2; putative. | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770. | 0.815 |
| ABK69578.1 | ABK72537.1 | MSMEG_6010 | MSMEG_6014 | Hypothetical protein; Identified by Glimmer2; putative. | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771. | 0.581 |
| ABK69578.1 | ABK74969.1 | MSMEG_6010 | MSMEG_6001 | Hypothetical protein; Identified by Glimmer2; putative. | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | 0.817 |
| ABK69578.1 | kstR2 | MSMEG_6010 | MSMEG_6009 | Hypothetical protein; Identified by Glimmer2; putative. | Transcriptional regulator, TetR family protein; Controls the expression of a small regulon that may play a role in the utilization of cholesterol. | 0.689 |
| ABK69721.1 | ABK70424.1 | MSMEG_6004 | MSMEG_6000 | Oxidoreductase, 2-nitropropane dioxygenase family protein; Identified by similarity to GB:AAF98273.1; match to protein family HMM PF03060. | Short chain dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. | 0.985 |
| ABK69721.1 | ABK71994.1 | MSMEG_6004 | MSMEG_6012 | Oxidoreductase, 2-nitropropane dioxygenase family protein; Identified by similarity to GB:AAF98273.1; match to protein family HMM PF03060. | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770. | 0.733 |
| ABK69721.1 | ABK72385.1 | MSMEG_6004 | MSMEG_5999 | Oxidoreductase, 2-nitropropane dioxygenase family protein; Identified by similarity to GB:AAF98273.1; match to protein family HMM PF03060. | Short chain dehydrogenase; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.984 |
| ABK69721.1 | ABK72537.1 | MSMEG_6004 | MSMEG_6014 | Oxidoreductase, 2-nitropropane dioxygenase family protein; Identified by similarity to GB:AAF98273.1; match to protein family HMM PF03060. | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771. | 0.848 |
| ABK69721.1 | ABK73022.1 | MSMEG_6004 | MSMEG_6002 | Oxidoreductase, 2-nitropropane dioxygenase family protein; Identified by similarity to GB:AAF98273.1; match to protein family HMM PF03060. | Coenzyme A transferase, subunit A; Identified by match to protein family HMM PF01144. | 0.993 |
| ABK69721.1 | ABK73153.1 | MSMEG_6004 | MSMEG_6003 | Oxidoreductase, 2-nitropropane dioxygenase family protein; Identified by similarity to GB:AAF98273.1; match to protein family HMM PF03060. | Coenzyme A transferase, subunit B. | 0.987 |
| ABK69721.1 | ABK73497.1 | MSMEG_6004 | MSMEG_5991 | Oxidoreductase, 2-nitropropane dioxygenase family protein; Identified by similarity to GB:AAF98273.1; match to protein family HMM PF03060. | MaoC like domain, putative; Identified by match to protein family HMM PF01575. | 0.598 |
| ABK69721.1 | ABK74969.1 | MSMEG_6004 | MSMEG_6001 | Oxidoreductase, 2-nitropropane dioxygenase family protein; Identified by similarity to GB:AAF98273.1; match to protein family HMM PF03060. | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. | 0.995 |
| ABK69721.1 | kstR2 | MSMEG_6004 | MSMEG_6009 | Oxidoreductase, 2-nitropropane dioxygenase family protein; Identified by similarity to GB:AAF98273.1; match to protein family HMM PF03060. | Transcriptional regulator, TetR family protein; Controls the expression of a small regulon that may play a role in the utilization of cholesterol. | 0.736 |
| ABK70424.1 | ABK69578.1 | MSMEG_6000 | MSMEG_6010 | Short chain dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. | Hypothetical protein; Identified by Glimmer2; putative. | 0.819 |
| ABK70424.1 | ABK69721.1 | MSMEG_6000 | MSMEG_6004 | Short chain dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. | Oxidoreductase, 2-nitropropane dioxygenase family protein; Identified by similarity to GB:AAF98273.1; match to protein family HMM PF03060. | 0.985 |
| ABK70424.1 | ABK71994.1 | MSMEG_6000 | MSMEG_6012 | Short chain dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770. | 0.953 |
| ABK70424.1 | ABK72385.1 | MSMEG_6000 | MSMEG_5999 | Short chain dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. | Short chain dehydrogenase; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.983 |
| ABK70424.1 | ABK72537.1 | MSMEG_6000 | MSMEG_6014 | Short chain dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771. | 0.892 |
| ABK70424.1 | ABK73022.1 | MSMEG_6000 | MSMEG_6002 | Short chain dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370. | Coenzyme A transferase, subunit A; Identified by match to protein family HMM PF01144. | 0.981 |
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