STRINGSTRING
ABK74315.1 ABK74315.1 ABK71808.1 ABK71808.1 ABK75990.1 ABK75990.1 ABK75159.1 ABK75159.1 ABK71837.1 ABK71837.1 ABK71555.1 ABK71555.1 ABK71785.1 ABK71785.1 ABK76045.1 ABK76045.1 ABK70351.1 ABK70351.1 ABK71539.1 ABK71539.1 ABK76118.1 ABK76118.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74315.1acetoacetyl-CoA synthase; Identified by match to protein family HMM PF00501; match to protein family HMM TIGR01217. (644 aa)    
Predicted Functional Partners:
ABK71808.1
3-hydroxybutyrate dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM TIGR01963.
  
 0.984
ABK75990.1
Putative 3-hydroxyacyl-CoA dehydrogenase; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737.
  
 0.953
ABK75159.1
3-hydroxyacyl-CoA dehydrogenase; Identified by match to protein family HMM PF00725; match to protein family HMM PF02737.
  
 
 0.940
ABK71837.1
3-hydroxybutyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00725; match to protein family HMM PF02737.
  
 
 0.940
ABK71555.1
3-hydroxybutyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00725; match to protein family HMM PF02737.
  
 
 0.940
ABK71785.1
3-hydroxybutyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00725; match to protein family HMM PF02737.
  
 
 0.939
ABK76045.1
3-hydroxybutyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00725; match to protein family HMM PF01210; match to protein family HMM PF02737; match to protein family HMM PF03446.
  
 
 0.939
ABK70351.1
3-ketoacyl-CoA thiolase; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.938
ABK71539.1
Beta-ketothiolase; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.938
ABK76118.1
Beta-ketothiolase; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.938
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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