Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70673.1 | ABK70879.1 | MSMEG_4502 | MSMEG_6027 | Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Major facilitator superfamily protein MFS_1; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | 0.595 |
| ABK70673.1 | ABK74315.1 | MSMEG_4502 | MSMEG_6024 | Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | acetoacetyl-CoA synthase; Identified by match to protein family HMM PF00501; match to protein family HMM TIGR01217. | 0.591 |
| ABK70673.1 | FecE | MSMEG_4502 | MSMEG_0015 | Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Ferric enterobactin transport ATP-binding protein FepC; Identified by match to protein family HMM PF00005. | 0.582 |
| ABK70879.1 | ABK70673.1 | MSMEG_6027 | MSMEG_4502 | Major facilitator superfamily protein MFS_1; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.595 |
| ABK70879.1 | ABK71808.1 | MSMEG_6027 | MSMEG_6026 | Major facilitator superfamily protein MFS_1; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | 3-hydroxybutyrate dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM TIGR01963. | 0.836 |
| ABK70879.1 | ABK73720.1 | MSMEG_6027 | MSMEG_1332 | Major facilitator superfamily protein MFS_1; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | Conserved hypothetical protein. | 0.524 |
| ABK70879.1 | ABK74315.1 | MSMEG_6027 | MSMEG_6024 | Major facilitator superfamily protein MFS_1; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | acetoacetyl-CoA synthase; Identified by match to protein family HMM PF00501; match to protein family HMM TIGR01217. | 0.888 |
| ABK70879.1 | ABK74898.1 | MSMEG_6027 | MSMEG_6028 | Major facilitator superfamily protein MFS_1; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | Transcriptional regulator, LysR family protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | 0.655 |
| ABK70879.1 | ABK75342.1 | MSMEG_6027 | MSMEG_6856 | Major facilitator superfamily protein MFS_1; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | Identified by match to protein family HMM PF03972. | 0.526 |
| ABK70879.1 | ABK76061.1 | MSMEG_6027 | MSMEG_6566 | Major facilitator superfamily protein MFS_1; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | Hypothetical protein; Identified by Glimmer2; putative. | 0.519 |
| ABK70879.1 | FecE | MSMEG_6027 | MSMEG_0015 | Major facilitator superfamily protein MFS_1; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | Ferric enterobactin transport ATP-binding protein FepC; Identified by match to protein family HMM PF00005. | 0.535 |
| ABK70879.1 | bfr | MSMEG_6027 | MSMEG_3564 | Major facilitator superfamily protein MFS_1; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | 0.575 |
| ABK70879.1 | ung | MSMEG_6027 | MSMEG_2399 | Major facilitator superfamily protein MFS_1; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.539 |
| ABK71808.1 | ABK70879.1 | MSMEG_6026 | MSMEG_6027 | 3-hydroxybutyrate dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM TIGR01963. | Major facilitator superfamily protein MFS_1; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | 0.836 |
| ABK71808.1 | ABK74315.1 | MSMEG_6026 | MSMEG_6024 | 3-hydroxybutyrate dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM TIGR01963. | acetoacetyl-CoA synthase; Identified by match to protein family HMM PF00501; match to protein family HMM TIGR01217. | 0.984 |
| ABK71808.1 | ABK74898.1 | MSMEG_6026 | MSMEG_6028 | 3-hydroxybutyrate dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM TIGR01963. | Transcriptional regulator, LysR family protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | 0.743 |
| ABK73720.1 | ABK70879.1 | MSMEG_1332 | MSMEG_6027 | Conserved hypothetical protein. | Major facilitator superfamily protein MFS_1; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | 0.524 |
| ABK73720.1 | ABK74315.1 | MSMEG_1332 | MSMEG_6024 | Conserved hypothetical protein. | acetoacetyl-CoA synthase; Identified by match to protein family HMM PF00501; match to protein family HMM TIGR01217. | 0.518 |
| ABK73720.1 | ABK75342.1 | MSMEG_1332 | MSMEG_6856 | Conserved hypothetical protein. | Identified by match to protein family HMM PF03972. | 0.583 |
| ABK73720.1 | ABK76061.1 | MSMEG_1332 | MSMEG_6566 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.518 |
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