STRINGSTRING
ABK74898.1 ABK74898.1 ABK72865.1 ABK72865.1 ABK71808.1 ABK71808.1 ABK70879.1 ABK70879.1 ABK74315.1 ABK74315.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74898.1Transcriptional regulator, LysR family protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. (303 aa)    
Predicted Functional Partners:
ABK72865.1
Conserved hypothetical protein.
  
    0.761
ABK71808.1
3-hydroxybutyrate dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM TIGR01963.
 
    0.743
ABK70879.1
Major facilitator superfamily protein MFS_1; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
 
    0.655
ABK74315.1
acetoacetyl-CoA synthase; Identified by match to protein family HMM PF00501; match to protein family HMM TIGR01217.
     
 0.563
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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