Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70556.1 | ABK70569.1 | MSMEG_6047 | MSMEG_6046 | Cation ABC transporter, periplasmic cation-binding protein, putative; Identified by match to protein family HMM PF01297. | Cation ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM PF00005. | 0.937 |
| ABK70556.1 | ABK70969.1 | MSMEG_6047 | MSMEG_6048 | Cation ABC transporter, periplasmic cation-binding protein, putative; Identified by match to protein family HMM PF01297. | Cobalamin synthesis protein/P47K; Identified by match to protein family HMM PF02492; match to protein family HMM PF07683. | 0.892 |
| ABK70556.1 | ABK71462.1 | MSMEG_6047 | MSMEG_6045 | Cation ABC transporter, periplasmic cation-binding protein, putative; Identified by match to protein family HMM PF01297. | ABC heavy metal transporter, inner membrane subunit; Identified by match to protein family HMM PF00950. | 0.998 |
| ABK70556.1 | ABK72459.1 | MSMEG_6047 | MSMEG_6052 | Cation ABC transporter, periplasmic cation-binding protein, putative; Identified by match to protein family HMM PF01297. | ABC transport protein, ATP-binding subunit; Identified by match to protein family HMM PF00005. | 0.887 |
| ABK70556.1 | ABK73332.1 | MSMEG_6047 | MSMEG_6044 | Cation ABC transporter, periplasmic cation-binding protein, putative; Identified by match to protein family HMM PF01297. | Periplasmic binding proteins and sugar binding domain of the LacI family protein, putative; Identified by match to protein family HMM PF00532. | 0.721 |
| ABK70556.1 | ABK73681.1 | MSMEG_6047 | MSMEG_1123 | Cation ABC transporter, periplasmic cation-binding protein, putative; Identified by match to protein family HMM PF01297. | Cobalamin synthesis protein; Identified by match to protein family HMM PF02492; match to protein family HMM PF07683. | 0.781 |
| ABK70556.1 | ABK74073.1 | MSMEG_6047 | MSMEG_6069 | Cation ABC transporter, periplasmic cation-binding protein, putative; Identified by match to protein family HMM PF01297. | CobW/P47K C- domain protein; Identified by match to protein family HMM PF07683. | 0.914 |
| ABK70556.1 | rpmB-2 | MSMEG_6047 | MSMEG_6068 | Cation ABC transporter, periplasmic cation-binding protein, putative; Identified by match to protein family HMM PF01297. | Ribosomal protein L28; Identified by match to protein family HMM PF00830; match to protein family HMM TIGR00009; Belongs to the bacterial ribosomal protein bL28 family. | 0.810 |
| ABK70556.1 | rpsN-2 | MSMEG_6047 | MSMEG_6066 | Cation ABC transporter, periplasmic cation-binding protein, putative; Identified by match to protein family HMM PF01297. | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.666 |
| ABK70556.1 | rpsR | MSMEG_6047 | MSMEG_6065 | Cation ABC transporter, periplasmic cation-binding protein, putative; Identified by match to protein family HMM PF01297. | Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.716 |
| ABK70569.1 | ABK70556.1 | MSMEG_6046 | MSMEG_6047 | Cation ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM PF00005. | Cation ABC transporter, periplasmic cation-binding protein, putative; Identified by match to protein family HMM PF01297. | 0.937 |
| ABK70569.1 | ABK70969.1 | MSMEG_6046 | MSMEG_6048 | Cation ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM PF00005. | Cobalamin synthesis protein/P47K; Identified by match to protein family HMM PF02492; match to protein family HMM PF07683. | 0.631 |
| ABK70569.1 | ABK71462.1 | MSMEG_6046 | MSMEG_6045 | Cation ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM PF00005. | ABC heavy metal transporter, inner membrane subunit; Identified by match to protein family HMM PF00950. | 0.942 |
| ABK70569.1 | ABK72459.1 | MSMEG_6046 | MSMEG_6052 | Cation ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM PF00005. | ABC transport protein, ATP-binding subunit; Identified by match to protein family HMM PF00005. | 0.468 |
| ABK70569.1 | ABK73332.1 | MSMEG_6046 | MSMEG_6044 | Cation ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM PF00005. | Periplasmic binding proteins and sugar binding domain of the LacI family protein, putative; Identified by match to protein family HMM PF00532. | 0.650 |
| ABK70969.1 | ABK70556.1 | MSMEG_6048 | MSMEG_6047 | Cobalamin synthesis protein/P47K; Identified by match to protein family HMM PF02492; match to protein family HMM PF07683. | Cation ABC transporter, periplasmic cation-binding protein, putative; Identified by match to protein family HMM PF01297. | 0.892 |
| ABK70969.1 | ABK70569.1 | MSMEG_6048 | MSMEG_6046 | Cobalamin synthesis protein/P47K; Identified by match to protein family HMM PF02492; match to protein family HMM PF07683. | Cation ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM PF00005. | 0.631 |
| ABK70969.1 | ABK71462.1 | MSMEG_6048 | MSMEG_6045 | Cobalamin synthesis protein/P47K; Identified by match to protein family HMM PF02492; match to protein family HMM PF07683. | ABC heavy metal transporter, inner membrane subunit; Identified by match to protein family HMM PF00950. | 0.828 |
| ABK70969.1 | ABK72459.1 | MSMEG_6048 | MSMEG_6052 | Cobalamin synthesis protein/P47K; Identified by match to protein family HMM PF02492; match to protein family HMM PF07683. | ABC transport protein, ATP-binding subunit; Identified by match to protein family HMM PF00005. | 0.524 |
| ABK70969.1 | ABK73332.1 | MSMEG_6048 | MSMEG_6044 | Cobalamin synthesis protein/P47K; Identified by match to protein family HMM PF02492; match to protein family HMM PF07683. | Periplasmic binding proteins and sugar binding domain of the LacI family protein, putative; Identified by match to protein family HMM PF00532. | 0.556 |
page 1 of 5