Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70192.1 | bluB | MSMEG_6627 | MSMEG_6053 | Identified by match to protein family HMM PF00881. | cob(II)yrinic acid a,c-diamide reductase; Identified by match to protein family HMM PF00881; match to protein family HMM TIGR02476. | 0.578 |
| ABK72459.1 | bluB | MSMEG_6052 | MSMEG_6053 | ABC transport protein, ATP-binding subunit; Identified by match to protein family HMM PF00005. | cob(II)yrinic acid a,c-diamide reductase; Identified by match to protein family HMM PF00881; match to protein family HMM TIGR02476. | 0.778 |
| ABK72459.1 | pxpA | MSMEG_6052 | MSMEG_6054 | ABC transport protein, ATP-binding subunit; Identified by match to protein family HMM PF00005. | LamB/YcsF; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.732 |
| ABK73605.1 | bluB | MSMEG_2800 | MSMEG_6053 | NADPH-dependent fmn reductase; Identified by match to protein family HMM PF03358. | cob(II)yrinic acid a,c-diamide reductase; Identified by match to protein family HMM PF00881; match to protein family HMM TIGR02476. | 0.908 |
| bluB | ABK70192.1 | MSMEG_6053 | MSMEG_6627 | cob(II)yrinic acid a,c-diamide reductase; Identified by match to protein family HMM PF00881; match to protein family HMM TIGR02476. | Identified by match to protein family HMM PF00881. | 0.578 |
| bluB | ABK72459.1 | MSMEG_6053 | MSMEG_6052 | cob(II)yrinic acid a,c-diamide reductase; Identified by match to protein family HMM PF00881; match to protein family HMM TIGR02476. | ABC transport protein, ATP-binding subunit; Identified by match to protein family HMM PF00005. | 0.778 |
| bluB | ABK73605.1 | MSMEG_6053 | MSMEG_2800 | cob(II)yrinic acid a,c-diamide reductase; Identified by match to protein family HMM PF00881; match to protein family HMM TIGR02476. | NADPH-dependent fmn reductase; Identified by match to protein family HMM PF03358. | 0.908 |
| bluB | cobB | MSMEG_6053 | MSMEG_2617 | cob(II)yrinic acid a,c-diamide reductase; Identified by match to protein family HMM PF00881; match to protein family HMM TIGR02476. | Cobyrinic Acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.869 |
| bluB | cobO | MSMEG_6053 | MSMEG_2616 | cob(II)yrinic acid a,c-diamide reductase; Identified by match to protein family HMM PF00881; match to protein family HMM TIGR02476. | cob(I)alamin adenosyltransferase; Identified by match to protein family HMM PF02572; match to protein family HMM TIGR00708. | 0.798 |
| bluB | cobQ | MSMEG_6053 | MSMEG_2588 | cob(II)yrinic acid a,c-diamide reductase; Identified by match to protein family HMM PF00881; match to protein family HMM TIGR02476. | Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.585 |
| bluB | cobS | MSMEG_6053 | MSMEG_4277 | cob(II)yrinic acid a,c-diamide reductase; Identified by match to protein family HMM PF00881; match to protein family HMM TIGR02476. | Cobalamin 5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.606 |
| bluB | cobT | MSMEG_6053 | MSMEG_4275 | cob(II)yrinic acid a,c-diamide reductase; Identified by match to protein family HMM PF00881; match to protein family HMM TIGR02476. | Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). | 0.993 |
| bluB | cobU | MSMEG_6053 | MSMEG_4274 | cob(II)yrinic acid a,c-diamide reductase; Identified by match to protein family HMM PF00881; match to protein family HMM TIGR02476. | Cobinamide kinase / cobinamide phosphate guanyltransferase; Identified by match to protein family HMM PF02283. | 0.620 |
| bluB | pxpA | MSMEG_6053 | MSMEG_6054 | cob(II)yrinic acid a,c-diamide reductase; Identified by match to protein family HMM PF00881; match to protein family HMM TIGR02476. | LamB/YcsF; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.746 |
| cobB | bluB | MSMEG_2617 | MSMEG_6053 | Cobyrinic Acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | cob(II)yrinic acid a,c-diamide reductase; Identified by match to protein family HMM PF00881; match to protein family HMM TIGR02476. | 0.869 |
| cobB | cobO | MSMEG_2617 | MSMEG_2616 | Cobyrinic Acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | cob(I)alamin adenosyltransferase; Identified by match to protein family HMM PF02572; match to protein family HMM TIGR00708. | 0.997 |
| cobB | cobQ | MSMEG_2617 | MSMEG_2588 | Cobyrinic Acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.962 |
| cobB | cobS | MSMEG_2617 | MSMEG_4277 | Cobyrinic Acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Cobalamin 5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.890 |
| cobB | cobT | MSMEG_2617 | MSMEG_4275 | Cobyrinic Acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). | 0.949 |
| cobB | cobU | MSMEG_2617 | MSMEG_4274 | Cobyrinic Acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Cobinamide kinase / cobinamide phosphate guanyltransferase; Identified by match to protein family HMM PF02283. | 0.934 |
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