STRINGSTRING
ABK75181.1 ABK75181.1 ABK73681.1 ABK73681.1 ABK70556.1 ABK70556.1 ABK69555.1 ABK69555.1 ABK74073.1 ABK74073.1 ABK70969.1 ABK70969.1 ABK75303.1 ABK75303.1 ABK72605.1 ABK72605.1 ABK72457.1 ABK72457.1 ABK71462.1 ABK71462.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK75181.1Hypothetical protein; Identified by Glimmer2; putative. (84 aa)    
Predicted Functional Partners:
ABK73681.1
Cobalamin synthesis protein; Identified by match to protein family HMM PF02492; match to protein family HMM PF07683.
     
 0.529
ABK70556.1
Cation ABC transporter, periplasmic cation-binding protein, putative; Identified by match to protein family HMM PF01297.
   
  
 0.516
ABK69555.1
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.511
ABK74073.1
CobW/P47K C- domain protein; Identified by match to protein family HMM PF07683.
  
  
 0.482
ABK70969.1
Cobalamin synthesis protein/P47K; Identified by match to protein family HMM PF02492; match to protein family HMM PF07683.
  
  
 0.481
ABK75303.1
Secreted protein.
   
  
 0.469
ABK72605.1
Lipoprotein; Identified by match to protein family HMM PF01497.
   
  
 0.438
ABK72457.1
Hypothetical protein; Identified by Glimmer2; putative.
   
  
 0.435
ABK71462.1
ABC heavy metal transporter, inner membrane subunit; Identified by match to protein family HMM PF00950.
   
  
 0.435
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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