Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69788.1 | ABK70091.1 | MSMEG_6059 | MSMEG_6058 | Conserved hypothetical protein. | Cadmium transporting P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525. | 0.926 |
ABK69788.1 | ABK75213.1 | MSMEG_6059 | MSMEG_6060 | Conserved hypothetical protein. | Permease; Identified by match to protein family HMM PF03773. | 0.599 |
ABK69788.1 | ABK75474.1 | MSMEG_6059 | MSMEG_6061 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.574 |
ABK70091.1 | ABK69788.1 | MSMEG_6058 | MSMEG_6059 | Cadmium transporting P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525. | Conserved hypothetical protein. | 0.926 |
ABK70091.1 | ABK75213.1 | MSMEG_6058 | MSMEG_6060 | Cadmium transporting P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525. | Permease; Identified by match to protein family HMM PF03773. | 0.603 |
ABK70091.1 | ABK75474.1 | MSMEG_6058 | MSMEG_6061 | Cadmium transporting P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525. | Conserved hypothetical protein. | 0.569 |
ABK70135.1 | ABK70299.1 | MSMEG_5777 | MSMEG_6502 | Transcription regulator; Identified by match to protein family HMM PF01047. | Conserved hypothetical protein. | 0.532 |
ABK70135.1 | ABK75213.1 | MSMEG_5777 | MSMEG_6060 | Transcription regulator; Identified by match to protein family HMM PF01047. | Permease; Identified by match to protein family HMM PF03773. | 0.430 |
ABK70135.1 | ABK75474.1 | MSMEG_5777 | MSMEG_6061 | Transcription regulator; Identified by match to protein family HMM PF01047. | Conserved hypothetical protein. | 0.427 |
ABK70299.1 | ABK70135.1 | MSMEG_6502 | MSMEG_5777 | Conserved hypothetical protein. | Transcription regulator; Identified by match to protein family HMM PF01047. | 0.532 |
ABK70299.1 | ABK75213.1 | MSMEG_6502 | MSMEG_6060 | Conserved hypothetical protein. | Permease; Identified by match to protein family HMM PF03773. | 0.534 |
ABK70299.1 | ABK75474.1 | MSMEG_6502 | MSMEG_6061 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.470 |
ABK73354.1 | ABK75213.1 | MSMEG_4536 | MSMEG_6060 | Conserved hypothetical protein. | Permease; Identified by match to protein family HMM PF03773. | 0.487 |
ABK73354.1 | ABK75474.1 | MSMEG_4536 | MSMEG_6061 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.674 |
ABK75213.1 | ABK69788.1 | MSMEG_6060 | MSMEG_6059 | Permease; Identified by match to protein family HMM PF03773. | Conserved hypothetical protein. | 0.599 |
ABK75213.1 | ABK70091.1 | MSMEG_6060 | MSMEG_6058 | Permease; Identified by match to protein family HMM PF03773. | Cadmium transporting P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525. | 0.603 |
ABK75213.1 | ABK70135.1 | MSMEG_6060 | MSMEG_5777 | Permease; Identified by match to protein family HMM PF03773. | Transcription regulator; Identified by match to protein family HMM PF01047. | 0.430 |
ABK75213.1 | ABK70299.1 | MSMEG_6060 | MSMEG_6502 | Permease; Identified by match to protein family HMM PF03773. | Conserved hypothetical protein. | 0.534 |
ABK75213.1 | ABK73354.1 | MSMEG_6060 | MSMEG_4536 | Permease; Identified by match to protein family HMM PF03773. | Conserved hypothetical protein. | 0.487 |
ABK75213.1 | ABK75474.1 | MSMEG_6060 | MSMEG_6061 | Permease; Identified by match to protein family HMM PF03773. | Conserved hypothetical protein. | 0.986 |
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