STRINGSTRING
ABK73194.1 ABK73194.1 ABK75412.1 ABK75412.1 ABK73941.1 ABK73941.1 clpC1 clpC1 ABK72513.1 ABK72513.1 cobK cobK cobF cobF cobL cobL cobN cobN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73194.1Conserved hypothetical protein. (268 aa)    
Predicted Functional Partners:
ABK75412.1
Conserved hypothetical protein.
 
    0.967
ABK73941.1
Phosphoglycerate mutase; Identified by match to protein family HMM PF00300.
 
    0.943
clpC1
Negative regulator of genetic competence ClpC/mecB; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP (By similarity). Degrades anti-sigma-E factor RseA in the presence of ClpP2 (Probable); Belongs to the ClpA/ClpB family. ClpC subfamily.
  
    0.677
ABK72513.1
Cobalamin biosynthesis protein cobIJ; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01466; match to protein family HMM TIGR01467; Belongs to the precorrin methyltransferase family.
 
    0.504
cobK
Precorrin-6x reductase; Identified by match to protein family HMM PF02571; match to protein family HMM TIGR00715.
 
    0.450
cobF
precorrin-6A synthase (deacetylating); Identified by match to protein family HMM PF00590; match to protein family HMM TIGR02434.
 
    0.437
cobL
precorrin-6Y C5,15-methyltransferase (decarboxylating); Identified by match to protein family HMM PF00590; match to protein family HMM TIGR02467; match to protein family HMM TIGR02469.
 
    0.433
cobN
Cobaltochelatase, CobN subunit; Identified by match to protein family HMM PF02514; match to protein family HMM TIGR02257.
 
    0.409
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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