STRINGSTRING
ABK73317.1 ABK73317.1 ABK74639.1 ABK74639.1 ABK70739.1 ABK70739.1 ABK72754.1 ABK72754.1 ABK71338.1 ABK71338.1 ABK74252.1 ABK74252.1 ABK69993.1 ABK69993.1 oppC oppC ABK69625.1 ABK69625.1 ABK73087.1 ABK73087.1 ABK72524.1 ABK72524.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73317.1Peptide transport system ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. (332 aa)    
Predicted Functional Partners:
ABK74639.1
Dipeptide transport ATP-binding protein DppD; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.
 
 
 
0.982
ABK70739.1
ABC transporter, membrane spanning protein; Identified by match to protein family HMM PF00528.
  
 0.974
ABK72754.1
ABC transporter, membrane spanning protein; Identified by match to protein family HMM PF00528.
 
 0.974
ABK71338.1
Oligopeptide ABC transporter integral membrane protein; Identified by match to protein family HMM PF00528.
  
 0.959
ABK74252.1
Putative ABC transporter periplasmic oligopeptide-binding protein; Identified by match to protein family HMM PF00496.
 
  
 0.925
ABK69993.1
Inner membrane ABC transporter permease protein YddQ; Identified by match to protein family HMM PF00528.
  
 0.917
oppC
ABC transporter, permease protein OppC; Identified by match to protein family HMM PF00528.
  
 0.908
ABK69625.1
Oligopeptide transport ATP-binding protein AppF; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.
  
 
 
0.905
ABK73087.1
ABC transporter permease protein; Identified by match to protein family HMM PF00528.
  
 0.905
ABK72524.1
ABC transporter permease protein; Identified by match to protein family HMM PF00528.
  
 0.900
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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