STRINGSTRING
ABK73163.1 ABK73163.1 ABK72815.1 ABK72815.1 ABK71220.1 ABK71220.1 ABK71286.1 ABK71286.1 ABK72665.1 ABK72665.1 ABK76188.1 ABK76188.1 ABK74824.1 ABK74824.1 ABK70127.1 ABK70127.1 ABK69658.1 ABK69658.1 ABK75635.1 ABK75635.1 ABK72533.1 ABK72533.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73163.1Anti-anti-sigma factor; Identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; Belongs to the anti-sigma-factor antagonist family. (119 aa)    
Predicted Functional Partners:
ABK72815.1
Conserved hypothetical protein.
 
 
 0.981
ABK71220.1
RsbW protein.
 
 
 0.939
ABK71286.1
RsbW protein.
  
 
 0.854
ABK72665.1
RNA polymerase sigma-F factor; Identified by match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; match to protein family HMM TIGR02980; Belongs to the sigma-70 factor family.
 
 
 0.845
ABK76188.1
Magnesium or manganese-dependent protein phosphatase; Identified by match to protein family HMM PF00072; match to protein family HMM PF07228.
 
 
 0.843
ABK74824.1
Stas domain, putative; Identified by match to protein family HMM PF01740.
   
  
 0.819
ABK70127.1
Probable serine/threonine-protein kinase PknB; Identified by match to protein family HMM PF00069; match to protein family HMM PF01163.
   
  
 0.700
ABK69658.1
Two-component sensor protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF05227.
 
  
 0.675
ABK75635.1
Stas domain protein; Identified by match to protein family HMM PF01740.
  
 
 0.669
ABK72533.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
   0.667
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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