Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69615.1 | ABK70515.1 | MSMEG_1654 | MSMEG_6134 | Isocitrate dehydrogenase, NADP-dependent; Identified by match to protein family HMM PF03971; match to protein family HMM TIGR00178; Belongs to the monomeric-type IDH family. | NADP-dependent fatty aldehyde dehydrogenase; Identified by match to protein family HMM PF00171. | 0.813 |
| ABK69615.1 | ABK76139.1 | MSMEG_1654 | MSMEG_4646 | Isocitrate dehydrogenase, NADP-dependent; Identified by match to protein family HMM PF03971; match to protein family HMM TIGR00178; Belongs to the monomeric-type IDH family. | Pyruvate synthase; Identified by match to protein family HMM PF01855. | 0.982 |
| ABK69615.1 | orB | MSMEG_1654 | MSMEG_4645 | Isocitrate dehydrogenase, NADP-dependent; Identified by match to protein family HMM PF03971; match to protein family HMM TIGR00178; Belongs to the monomeric-type IDH family. | Alpha oxoglutarate ferredoxin oxidoreductase, beta subunit; Identified by match to protein family HMM PF02775. | 0.947 |
| ABK69760.1 | ABK70515.1 | MSMEG_5930 | MSMEG_6134 | Conserved hypothetical protein. | NADP-dependent fatty aldehyde dehydrogenase; Identified by match to protein family HMM PF00171. | 0.532 |
| ABK69760.1 | saeC | MSMEG_5930 | MSMEG_0046 | Conserved hypothetical protein. | Conserved hypothetical protein; May be involved in assembly of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Involved in DNA conjugation in recipient (MKD8) strain. | 0.727 |
| ABK70515.1 | ABK69615.1 | MSMEG_6134 | MSMEG_1654 | NADP-dependent fatty aldehyde dehydrogenase; Identified by match to protein family HMM PF00171. | Isocitrate dehydrogenase, NADP-dependent; Identified by match to protein family HMM PF03971; match to protein family HMM TIGR00178; Belongs to the monomeric-type IDH family. | 0.813 |
| ABK70515.1 | ABK69760.1 | MSMEG_6134 | MSMEG_5930 | NADP-dependent fatty aldehyde dehydrogenase; Identified by match to protein family HMM PF00171. | Conserved hypothetical protein. | 0.532 |
| ABK70515.1 | ABK71577.1 | MSMEG_6134 | MSMEG_6133 | NADP-dependent fatty aldehyde dehydrogenase; Identified by match to protein family HMM PF00171. | 5-dehydro-4-deoxyglucarate dehydratase; Identified by match to protein family HMM PF00701; Belongs to the DapA family. | 0.997 |
| ABK70515.1 | ABK73956.1 | MSMEG_6134 | MSMEG_6132 | NADP-dependent fatty aldehyde dehydrogenase; Identified by match to protein family HMM PF00171. | Glucarate dehydratase; Identified by match to protein family HMM PF01188; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.853 |
| ABK70515.1 | ABK74003.1 | MSMEG_6134 | MSMEG_3801 | NADP-dependent fatty aldehyde dehydrogenase; Identified by match to protein family HMM PF00171. | Conserved hypothetical protein. | 0.533 |
| ABK70515.1 | ABK74117.1 | MSMEG_6134 | MSMEG_0805 | NADP-dependent fatty aldehyde dehydrogenase; Identified by match to protein family HMM PF00171. | Conserved hypothetical protein. | 0.535 |
| ABK70515.1 | ABK74298.1 | MSMEG_6134 | MSMEG_3754 | NADP-dependent fatty aldehyde dehydrogenase; Identified by match to protein family HMM PF00171. | TPR-repeat-containing protein. | 0.534 |
| ABK70515.1 | ABK76139.1 | MSMEG_6134 | MSMEG_4646 | NADP-dependent fatty aldehyde dehydrogenase; Identified by match to protein family HMM PF00171. | Pyruvate synthase; Identified by match to protein family HMM PF01855. | 0.846 |
| ABK70515.1 | orB | MSMEG_6134 | MSMEG_4645 | NADP-dependent fatty aldehyde dehydrogenase; Identified by match to protein family HMM PF00171. | Alpha oxoglutarate ferredoxin oxidoreductase, beta subunit; Identified by match to protein family HMM PF02775. | 0.817 |
| ABK70515.1 | saeC | MSMEG_6134 | MSMEG_0046 | NADP-dependent fatty aldehyde dehydrogenase; Identified by match to protein family HMM PF00171. | Conserved hypothetical protein; May be involved in assembly of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Involved in DNA conjugation in recipient (MKD8) strain. | 0.532 |
| ABK71577.1 | ABK70515.1 | MSMEG_6133 | MSMEG_6134 | 5-dehydro-4-deoxyglucarate dehydratase; Identified by match to protein family HMM PF00701; Belongs to the DapA family. | NADP-dependent fatty aldehyde dehydrogenase; Identified by match to protein family HMM PF00171. | 0.997 |
| ABK71577.1 | ABK73956.1 | MSMEG_6133 | MSMEG_6132 | 5-dehydro-4-deoxyglucarate dehydratase; Identified by match to protein family HMM PF00701; Belongs to the DapA family. | Glucarate dehydratase; Identified by match to protein family HMM PF01188; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.993 |
| ABK73956.1 | ABK70515.1 | MSMEG_6132 | MSMEG_6134 | Glucarate dehydratase; Identified by match to protein family HMM PF01188; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | NADP-dependent fatty aldehyde dehydrogenase; Identified by match to protein family HMM PF00171. | 0.853 |
| ABK73956.1 | ABK71577.1 | MSMEG_6132 | MSMEG_6133 | Glucarate dehydratase; Identified by match to protein family HMM PF01188; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 5-dehydro-4-deoxyglucarate dehydratase; Identified by match to protein family HMM PF00701; Belongs to the DapA family. | 0.993 |
| ABK74003.1 | ABK70515.1 | MSMEG_3801 | MSMEG_6134 | Conserved hypothetical protein. | NADP-dependent fatty aldehyde dehydrogenase; Identified by match to protein family HMM PF00171. | 0.533 |
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