STRINGSTRING
ABK74311.1 ABK74311.1 ABK76103.1 ABK76103.1 ABK71819.1 ABK71819.1 ABK70515.1 ABK70515.1 ABK71577.1 ABK71577.1 ABK73956.1 ABK73956.1 ABK76188.1 ABK76188.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74311.1Hypothetical protein; Identified by Glimmer2; putative. (134 aa)    
Predicted Functional Partners:
ABK76103.1
Membrane protein, TerC family protein; Identified by match to protein family HMM PF03741.
       0.543
ABK71819.1
Non-ribosomal peptide synthetase; Identified by match to protein family HMM PF00132; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733; match to protein family HMM TIGR02353.
  
 
 0.524
ABK70515.1
NADP-dependent fatty aldehyde dehydrogenase; Identified by match to protein family HMM PF00171.
  
    0.507
ABK71577.1
5-dehydro-4-deoxyglucarate dehydratase; Identified by match to protein family HMM PF00701; Belongs to the DapA family.
       0.449
ABK73956.1
Glucarate dehydratase; Identified by match to protein family HMM PF01188; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
  
    0.444
ABK76188.1
Magnesium or manganese-dependent protein phosphatase; Identified by match to protein family HMM PF00072; match to protein family HMM PF07228.
  
    0.423
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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