ABK73945.1 protein (Mycolicibacterium smegmatis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

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Experiments

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[Homology]

Score

ABK73945.1

Conserved hypothetical protein. (108 aa)

Predicted Functional Partners:

ABK72239.1

0.867

ABK73310.1

0.813

ABK76200.1

0.811

ABK70164.1

0.671

ABK70167.1

0.632

ABK70716.1

0.597

ABK74317.1

0.595

ABK75960.1

0.575

ABK75842.1

0.564

ABK74249.1

0.554

Your Current Organism:

Mycolicibacterium smegmatis

NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABK70164.1	ABK70716.1	MSMEG_6078	MSMEG_2742	LpqE protein.	Identified by match to protein family HMM PF01476.	0.612
ABK70164.1	ABK73945.1	MSMEG_6078	MSMEG_6164	LpqE protein.	Conserved hypothetical protein.	0.671
ABK70164.1	ABK74249.1	MSMEG_6078	MSMEG_1598	LpqE protein.	Conserved hypothetical protein.	0.727
ABK70164.1	ABK75842.1	MSMEG_6078	MSMEG_4489	LpqE protein.	Conserved hypothetical protein.	0.660
ABK70164.1	ABK75960.1	MSMEG_6078	MSMEG_3884	LpqE protein.	Conserved hypothetical protein.	0.676
ABK70167.1	ABK72239.1	MSMEG_6169	MSMEG_6165	Type II/IV secretion system protein; Identified by match to protein family HMM PF00437.	Conserved hypothetical protein.	0.579
ABK70167.1	ABK73310.1	MSMEG_6169	MSMEG_6167	Type II/IV secretion system protein; Identified by match to protein family HMM PF00437.	Bacterial type II secretion system protein F domain; Identified by match to protein family HMM PF00482.	0.957
ABK70167.1	ABK73945.1	MSMEG_6169	MSMEG_6164	Type II/IV secretion system protein; Identified by match to protein family HMM PF00437.	Conserved hypothetical protein.	0.632
ABK70167.1	ABK74317.1	MSMEG_6169	MSMEG_6171	Type II/IV secretion system protein; Identified by match to protein family HMM PF00437.	Conserved hypothetical protein.	0.970
ABK70167.1	ABK76200.1	MSMEG_6169	MSMEG_6168	Type II/IV secretion system protein; Identified by match to protein family HMM PF00437.	Bacterial type II secretion system protein F domain; Identified by match to protein family HMM PF00482.	0.939
ABK70716.1	ABK70164.1	MSMEG_2742	MSMEG_6078	Identified by match to protein family HMM PF01476.	LpqE protein.	0.612
ABK70716.1	ABK73945.1	MSMEG_2742	MSMEG_6164	Identified by match to protein family HMM PF01476.	Conserved hypothetical protein.	0.597
ABK70716.1	ABK74249.1	MSMEG_2742	MSMEG_1598	Identified by match to protein family HMM PF01476.	Conserved hypothetical protein.	0.654
ABK70716.1	ABK75842.1	MSMEG_2742	MSMEG_4489	Identified by match to protein family HMM PF01476.	Conserved hypothetical protein.	0.618
ABK70716.1	ABK75960.1	MSMEG_2742	MSMEG_3884	Identified by match to protein family HMM PF01476.	Conserved hypothetical protein.	0.565
ABK72239.1	ABK70167.1	MSMEG_6165	MSMEG_6169	Conserved hypothetical protein.	Type II/IV secretion system protein; Identified by match to protein family HMM PF00437.	0.579
ABK72239.1	ABK73310.1	MSMEG_6165	MSMEG_6167	Conserved hypothetical protein.	Bacterial type II secretion system protein F domain; Identified by match to protein family HMM PF00482.	0.804
ABK72239.1	ABK73945.1	MSMEG_6165	MSMEG_6164	Conserved hypothetical protein.	Conserved hypothetical protein.	0.867
ABK72239.1	ABK74317.1	MSMEG_6165	MSMEG_6171	Conserved hypothetical protein.	Conserved hypothetical protein.	0.561
ABK72239.1	ABK76200.1	MSMEG_6165	MSMEG_6168	Conserved hypothetical protein.	Bacterial type II secretion system protein F domain; Identified by match to protein family HMM PF00482.	0.803