STRINGSTRING
ABK76200.1 ABK76200.1 ABK73310.1 ABK73310.1 ABK70167.1 ABK70167.1 ABK74317.1 ABK74317.1 ABK71985.1 ABK71985.1 ABK73945.1 ABK73945.1 ABK72239.1 ABK72239.1 ABK72925.1 ABK72925.1 ABK74439.1 ABK74439.1 ABK72801.1 ABK72801.1 ABK72118.1 ABK72118.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK76200.1Bacterial type II secretion system protein F domain; Identified by match to protein family HMM PF00482. (210 aa)    
Predicted Functional Partners:
ABK73310.1
Bacterial type II secretion system protein F domain; Identified by match to protein family HMM PF00482.
 
    0.970
ABK70167.1
Type II/IV secretion system protein; Identified by match to protein family HMM PF00437.
 
  
 0.939
ABK74317.1
Conserved hypothetical protein.
 
  
 0.917
ABK71985.1
Conserved hypothetical protein.
 
  
 0.851
ABK73945.1
Conserved hypothetical protein.
  
  
 0.811
ABK72239.1
Conserved hypothetical protein.
  
    0.803
ABK72925.1
Conserved hypothetical protein.
  
   
 0.762
ABK74439.1
Conserved hypothetical protein.
  
     0.760
ABK72801.1
GTP cyclohydrolase.
   
  
 0.672
ABK72118.1
Conserved hypothetical protein.
  
    0.664
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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