STRINGSTRING
ABK73661.1 ABK73661.1 ABK74603.1 ABK74603.1 ABK70790.1 ABK70790.1 pheT pheT ABK73832.1 ABK73832.1 ABK75712.1 ABK75712.1 ABK72177.1 ABK72177.1 whiA whiA ABK73076.1 ABK73076.1 ABK72472.1 ABK72472.1 ABK76142.1 ABK76142.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73661.1Identified by match to protein family HMM PF00149. (328 aa)    
Predicted Functional Partners:
ABK74603.1
Cysteine synthase/cystathionine beta-synthase family protein; Identified by match to protein family HMM PF00291.
  
  
 0.931
ABK70790.1
Transglycosylase; Identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM PF03793.
       0.779
pheT
phenylalanyl-tRNA synthetase, beta subunit; Identified by match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HMM PF03484; match to protein family HMM TIGR00472; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
 
    0.697
ABK73832.1
Conserved hypothetical protein.
  
    0.697
ABK75712.1
Conserved hypothetical protein.
  
    0.687
ABK72177.1
Dolichyl-phosphate-mannose-protein mannosyltransferase; Identified by match to protein family HMM PF02366.
  
    0.667
whiA
Conserved hypothetical protein; Involved in cell division and chromosome segregation.
 
    0.665
ABK73076.1
RecF-gyrB intergenic region protein; identified by match to protein family HMM PF05258; Belongs to the UPF0232 family.
  
    0.662
ABK72472.1
DNA polymerase III, delta subunit; Identified by match to protein family HMM PF06144.
 
    0.652
ABK76142.1
Possible conserved transmembrane protein.
 
    0.650
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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