STRINGSTRING
ABK74499.1 ABK74499.1 ABK71273.1 ABK71273.1 ABK75197.1 ABK75197.1 ABK70673.1 ABK70673.1 ABK70868.1 ABK70868.1 ABK70533.1 ABK70533.1 ABK70204.1 ABK70204.1 ABK72877.1 ABK72877.1 ABK69608.1 ABK69608.1 ABK75922.1 ABK75922.1 ABK69907.1 ABK69907.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74499.1GatB/Yqey domain protein; Identified by match to protein family HMM PF02637. (154 aa)    
Predicted Functional Partners:
ABK71273.1
Conserved hypothetical protein; Identified by match to protein family HMM PF04402.
  
    0.781
ABK75197.1
Integral membrane protein.
  
    0.714
ABK70673.1
Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
  
  
 0.656
ABK70868.1
Lipoprotein; Identified by match to protein family HMM PF01882.
  
    0.636
ABK70533.1
Integral membrane protein.
  
    0.621
ABK70204.1
HIT family protein; Identified by match to protein family HMM PF01230.
  
  
 0.618
ABK72877.1
Peptide synthetase mbtf; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01733.
   
  
 0.603
ABK69608.1
Hypothetical protein; Identified by Glimmer2; putative.
   
  
 0.593
ABK75922.1
Manganese containing catalase; Identified by match to protein family HMM PF05067.
  
    0.591
ABK69907.1
Conserved hypothetical protein, putative; Identified by match to protein family HMM PF02641.
   
  
 0.587
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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