STRINGSTRING
ABK74025.1 ABK74025.1 ABK72952.1 ABK72952.1 ABK70868.1 ABK70868.1 ABK75197.1 ABK75197.1 ABK74434.1 ABK74434.1 ABK70533.1 ABK70533.1 ABK72027.1 ABK72027.1 ABK72243.1 ABK72243.1 ABK70536.1 ABK70536.1 lfrR lfrR ABK74689.1 ABK74689.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74025.1Integral membrane protein. (330 aa)    
Predicted Functional Partners:
ABK72952.1
Integral membrane protein; Identified by match to protein family HMM PF06271.
 
    0.966
ABK70868.1
Lipoprotein; Identified by match to protein family HMM PF01882.
 
  
 0.849
ABK75197.1
Integral membrane protein.
 
    0.796
ABK74434.1
Secreted protein.
 
    0.795
ABK70533.1
Integral membrane protein.
 
     0.758
ABK72027.1
ATPase family protein associated with various cellular activities (AAA); Identified by match to protein family HMM PF07726; match to protein family HMM PF07728.
 
    0.586
ABK72243.1
RDD family protein; Identified by match to protein family HMM PF06271.
 
    0.567
ABK70536.1
Probable conserved mce associated transmembrane protein; Identified by match to protein family HMM PF06271.
 
    0.502
lfrR
TetR family protein transcriptional repressor LfrR; Represses the transcription of the lfrRA operon by binding directly to the promoter region of lfrR-lfrA. Binds specifically to a 143-bp region upstream of the lfrR gene.
  
    0.485
ABK74689.1
Protein of unknown function DUF58, putative.
 
  
 0.473
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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