Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69833.1 | ABK71502.1 | MSMEG_0071 | MSMEG_6231 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.680 |
ABK69833.1 | ABK72554.1 | MSMEG_0071 | MSMEG_0254 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.642 |
ABK69833.1 | ABK72725.1 | MSMEG_0071 | MSMEG_6932 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.550 |
ABK69833.1 | ABK72831.1 | MSMEG_0071 | MSMEG_1504 | Conserved hypothetical protein. | Fluoroquinolone transport system permease protein; Probable antibiotic-transport integral membrane leucine and alanine and valine rich protein abc transporter. | 0.467 |
ABK69833.1 | ABK74255.1 | MSMEG_0071 | MSMEG_5412 | Conserved hypothetical protein. | Immunogenic protein MPT63. | 0.622 |
ABK69833.1 | ABK75242.1 | MSMEG_0071 | MSMEG_1503 | Conserved hypothetical protein. | Probable antibiotic-transport integral membrane leucine and valine rich protein abc transporter. | 0.519 |
ABK69833.1 | ABK75545.1 | MSMEG_0071 | MSMEG_3531 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.785 |
ABK69833.1 | ABK76080.1 | MSMEG_0071 | MSMEG_0068 | Conserved hypothetical protein. | Probable conserved transmembrane protein; Identified by match to protein family HMM PF04600; match to protein family HMM TIGR02958. | 0.779 |
ABK71502.1 | ABK69833.1 | MSMEG_6231 | MSMEG_0071 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.680 |
ABK71502.1 | ABK72554.1 | MSMEG_6231 | MSMEG_0254 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.749 |
ABK71502.1 | ABK72725.1 | MSMEG_6231 | MSMEG_6932 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.673 |
ABK71502.1 | ABK72831.1 | MSMEG_6231 | MSMEG_1504 | Conserved hypothetical protein. | Fluoroquinolone transport system permease protein; Probable antibiotic-transport integral membrane leucine and alanine and valine rich protein abc transporter. | 0.774 |
ABK71502.1 | ABK73314.1 | MSMEG_6231 | MSMEG_0409 | Conserved hypothetical protein. | Condensation domain protein; Identified by match to protein family HMM PF00668. | 0.682 |
ABK71502.1 | ABK74255.1 | MSMEG_6231 | MSMEG_5412 | Conserved hypothetical protein. | Immunogenic protein MPT63. | 0.741 |
ABK71502.1 | ABK75242.1 | MSMEG_6231 | MSMEG_1503 | Conserved hypothetical protein. | Probable antibiotic-transport integral membrane leucine and valine rich protein abc transporter. | 0.777 |
ABK71502.1 | ABK75545.1 | MSMEG_6231 | MSMEG_3531 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.736 |
ABK71502.1 | ABK75658.1 | MSMEG_6231 | MSMEG_5517 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.645 |
ABK71502.1 | ABK76080.1 | MSMEG_6231 | MSMEG_0068 | Conserved hypothetical protein. | Probable conserved transmembrane protein; Identified by match to protein family HMM PF04600; match to protein family HMM TIGR02958. | 0.668 |
ABK72554.1 | ABK69833.1 | MSMEG_0254 | MSMEG_0071 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.642 |
ABK72554.1 | ABK71502.1 | MSMEG_0254 | MSMEG_6231 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.749 |
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