STRINGSTRING
ABK74817.1 ABK74817.1 ABK74204.1 ABK74204.1 ABK73839.1 ABK73839.1 ABK72291.1 ABK72291.1 ABK73601.1 ABK73601.1 ABK71285.1 ABK71285.1 ABK70293.1 ABK70293.1 ABK72628.1 ABK72628.1 ABK75951.1 ABK75951.1 ABK73068.1 ABK73068.1 ABK72639.1 ABK72639.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74817.1Conserved hypothetical protein; Identified by match to protein family HMM PF05762. (497 aa)    
Predicted Functional Partners:
ABK74204.1
ATPase associated with various cellular activities, AAA-5; Identified by match to protein family HMM PF07728.
 
    0.960
ABK73839.1
Alcohol dehydrogenase, iron-containing; Identified by match to protein family HMM PF00465.
 
    0.905
ABK72291.1
ATPase associated with various cellular activities; Identified by match to protein family HMM PF07728.
 
    0.781
ABK73601.1
Putative two-component system sensor kinase; Identified by match to protein family HMM PF02518; match to protein family HMM PF07730.
 
    0.723
ABK71285.1
1,3-propanediol dehydrogenase; Identified by match to protein family HMM PF00465.
 
    0.723
ABK70293.1
ATPase associated with various cellular activities, AAA_5; Identified by match to protein family HMM PF00004; match to protein family HMM PF07726; match to protein family HMM PF07728.
 
    0.702
ABK72628.1
Conserved hypothetical protein.
 
    0.685
ABK75951.1
Two-component system, regulatory protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196.
 
    0.479
ABK73068.1
Radical SAM domain protein; Identified by match to protein family HMM PF04055.
 
    0.474
ABK72639.1
Response regulator receiver domain protein; Identified by match to protein family HMM PF07080.
  
    0.419
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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