Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK71025.1 | ABK73280.1 | MSMEG_4280 | MSMEG_6282 | Short chain dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00561. | KanY protein. | 0.507 |
ABK71067.1 | ABK73280.1 | MSMEG_1842 | MSMEG_6282 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | KanY protein. | 0.406 |
ABK71187.1 | ABK73280.1 | MSMEG_6402 | MSMEG_6282 | PAP2 superfamily protein; Involved in the biosynthesis of decaprenylphosphoryl arabinose (DPA) a precursor for arabinan synthesis in mycobacterial cell wall biosynthesis. Could be involved in the dephosphorylation of decaprenylphosphoryl-5-phosphoribose (DPPR) to decaprenyl-phospho- ribose (DPR); Belongs to the PA-phosphatase related phosphoesterase family. | KanY protein. | 0.402 |
ABK71928.1 | ABK73280.1 | MSMEG_1067 | MSMEG_6282 | Conserved hypothetical protein; Identified by match to protein family HMM PF00903. | KanY protein. | 0.439 |
ABK72904.1 | ABK73280.1 | MSMEG_5635 | MSMEG_6282 | Conserved hypothetical protein. | KanY protein. | 0.408 |
ABK73266.1 | ABK73280.1 | MSMEG_2755 | MSMEG_6282 | Conserved hypothetical protein; Identified by match to protein family HMM PF03631. | KanY protein. | 0.425 |
ABK73280.1 | ABK71025.1 | MSMEG_6282 | MSMEG_4280 | KanY protein. | Short chain dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00561. | 0.507 |
ABK73280.1 | ABK71067.1 | MSMEG_6282 | MSMEG_1842 | KanY protein. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.406 |
ABK73280.1 | ABK71187.1 | MSMEG_6282 | MSMEG_6402 | KanY protein. | PAP2 superfamily protein; Involved in the biosynthesis of decaprenylphosphoryl arabinose (DPA) a precursor for arabinan synthesis in mycobacterial cell wall biosynthesis. Could be involved in the dephosphorylation of decaprenylphosphoryl-5-phosphoribose (DPPR) to decaprenyl-phospho- ribose (DPR); Belongs to the PA-phosphatase related phosphoesterase family. | 0.402 |
ABK73280.1 | ABK71928.1 | MSMEG_6282 | MSMEG_1067 | KanY protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF00903. | 0.439 |
ABK73280.1 | ABK72904.1 | MSMEG_6282 | MSMEG_5635 | KanY protein. | Conserved hypothetical protein. | 0.408 |
ABK73280.1 | ABK73266.1 | MSMEG_6282 | MSMEG_2755 | KanY protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF03631. | 0.425 |
ABK73280.1 | ABK74030.1 | MSMEG_6282 | MSMEG_6283 | KanY protein. | FAD binding domain protein; Identified by match to protein family HMM PF01565. | 0.668 |
ABK73280.1 | ABK74616.1 | MSMEG_6282 | MSMEG_6284 | KanY protein. | Cyclopropane-fatty-acyl-phospholipid synthase; Identified by match to protein family HMM PF02353. | 0.795 |
ABK73280.1 | ABK75788.1 | MSMEG_6282 | MSMEG_3781 | KanY protein. | Conserved hypothetical protein. | 0.410 |
ABK74030.1 | ABK73280.1 | MSMEG_6283 | MSMEG_6282 | FAD binding domain protein; Identified by match to protein family HMM PF01565. | KanY protein. | 0.668 |
ABK74030.1 | ABK74616.1 | MSMEG_6283 | MSMEG_6284 | FAD binding domain protein; Identified by match to protein family HMM PF01565. | Cyclopropane-fatty-acyl-phospholipid synthase; Identified by match to protein family HMM PF02353. | 0.970 |
ABK74616.1 | ABK73280.1 | MSMEG_6284 | MSMEG_6282 | Cyclopropane-fatty-acyl-phospholipid synthase; Identified by match to protein family HMM PF02353. | KanY protein. | 0.795 |
ABK74616.1 | ABK74030.1 | MSMEG_6284 | MSMEG_6283 | Cyclopropane-fatty-acyl-phospholipid synthase; Identified by match to protein family HMM PF02353. | FAD binding domain protein; Identified by match to protein family HMM PF01565. | 0.970 |
ABK75788.1 | ABK73280.1 | MSMEG_3781 | MSMEG_6282 | Conserved hypothetical protein. | KanY protein. | 0.410 |