STRINGSTRING
ABK74030.1 ABK74030.1 ABK74616.1 ABK74616.1 ABK73280.1 ABK73280.1 ABK70179.1 ABK70179.1 ABK70320.1 ABK70320.1 ABK74962.1 ABK74962.1 atpD atpD ABK72067.1 ABK72067.1 ABK71617.1 ABK71617.1 ABK75553.1 ABK75553.1 ABK74218.1 ABK74218.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ABK74030.1FAD binding domain protein; Identified by match to protein family HMM PF01565. (466 aa)    
Predicted Functional Partners:
ABK74616.1
Cyclopropane-fatty-acyl-phospholipid synthase; Identified by match to protein family HMM PF02353.
 
    0.970
ABK73280.1
KanY protein.
  
    0.668
ABK70179.1
Glycerol-3-phosphate acyltransferase; Identified by match to protein family HMM PF01553; Belongs to the GPAT/DAPAT family.
   
 0.662
ABK70320.1
phytanoyl-CoA dioxygenase; Identified by match to protein family HMM PF05721.
 
 0.637
ABK74962.1
Prenyltransferase, UbiA family protein; Involved in the biosynthesis of decaprenylphosphoryl arabinose (DPA) a precursor for arabinan synthesis in mycobacterial cell wall biosynthesis. Catalyzes the transfer of a 5-phosphoribosyl residue from phosphoribose diphosphate (pRpp) to decaprenyl phosphate (DP) to form decaprenylphosphoryl-5-phosphoribose (DPPR).
  
 
 0.614
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
  
 0.610
ABK72067.1
FMN-dependent dehydrogenase; Identified by match to protein family HMM PF01070.
  
 0.584
ABK71617.1
Lactate 2-monooxygenase; Identified by match to protein family HMM PF01070.
  
 0.568
ABK75553.1
Hypothetical protein; Identified by Glimmer2; putative.
  
 0.566
ABK74218.1
Lactate 2-monooxygenase; Identified by match to protein family HMM PF01070.
  
 0.566
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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