STRINGSTRING
ABK70094.1 ABK70094.1 ABK69695.1 ABK69695.1 hisC hisC hisC-2 hisC-2 ABK75655.1 ABK75655.1 ABK75781.1 ABK75781.1 ABK70561.1 ABK70561.1 ABK71925.1 ABK71925.1 ABK75336.1 ABK75336.1 kdc kdc ABK70406.1 ABK70406.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Experiments
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Textmining
[Homology]
Score
ABK70094.1D-amino-acid dehydrogenase; Identified by match to protein family HMM PF01266. (416 aa)    
Predicted Functional Partners:
ABK69695.1
Histidinol-phosphate aminotransferase 2; Identified by match to protein family HMM PF00155.
  
 
 0.909
hisC
Histidinol-phosphate aminotransferase; Identified by match to protein family HMM PF00155; match to protein family HMM TIGR01141; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
  
 
 0.909
hisC-2
Histidinol-phosphate aminotransferase; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.907
ABK75655.1
D-amino-acid dehydrogenase; Identified by match to protein family HMM PF01266.
  
 
 
0.903
ABK75781.1
Putative DNA-binding protein.
 
     0.845
ABK70561.1
Trypsin; Identified by match to protein family HMM PF00089; match to protein family HMM PF00595.
  
 
 0.687
ABK71925.1
Transcription elongation factor GreA; Identified by match to protein family HMM PF01272.
 
    0.658
ABK75336.1
Conserved hypothetical protein; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 
 0.569
kdc
Indole-3-pyruvate decarboxylase; Decarboxylates branched-chain and aromatic alpha-keto acids to aldehydes.
   
  
 0.554
ABK70406.1
Hydrolase, nudix family protein, putative; Identified by match to protein family HMM PF00293.
 
 
 0.531
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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