STRINGSTRING
ABK76132.1 ABK76132.1 ABK74135.1 ABK74135.1 ABK71925.1 ABK71925.1 ABK73223.1 ABK73223.1 ABK74076.1 ABK74076.1 ABK74579.1 ABK74579.1 ABK72093.1 ABK72093.1 ABK73056.1 ABK73056.1 ABK73496.1 ABK73496.1 ABK72307.1 ABK72307.1 ABK72020.1 ABK72020.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK76132.1Transcriptional regulatory protein; Identified by match to protein family HMM PF00440. (190 aa)    
Predicted Functional Partners:
ABK74135.1
Putative transcriptional regulator.
  
    0.765
ABK71925.1
Transcription elongation factor GreA; Identified by match to protein family HMM PF01272.
 
  
 0.721
ABK73223.1
Conserved hypothetical protein.
  
    0.559
ABK74076.1
Oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.
 
  
 0.514
ABK74579.1
Glyoxylate reductase; Identified by match to protein family HMM PF00389; match to protein family HMM PF02826; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
  
 0.503
ABK72093.1
Conserved hypothetical protein; Identified by match to protein family HMM PF08044.
 
    0.501
ABK73056.1
Shikimate transporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
  
    0.492
ABK73496.1
Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family.
  
    0.491
ABK72307.1
5-exo-alcohol dehydrogenase; Identified by match to protein family HMM PF00107.
  
    0.487
ABK72020.1
Aldehyde dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.
  
    0.486
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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