STRINGSTRING
ABK72384.1 ABK72384.1 gltX-2 gltX-2 ABK72077.1 ABK72077.1 ABK71329.1 ABK71329.1 ABK75705.1 ABK75705.1 GlnQ GlnQ ABK71661.1 ABK71661.1 ABK72437.1 ABK72437.1 ABK75556.1 ABK75556.1 clpP clpP clpP-2 clpP-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72384.1Conserved hypothetical protein. (122 aa)    
Predicted Functional Partners:
gltX-2
glutamyl-tRNA synthetase; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily.
  
    0.779
ABK72077.1
Putative ribosylglycohydrolase; Identified by match to protein family HMM PF00782; match to protein family HMM PF03747.
   
 
 0.750
ABK71329.1
Identified by match to protein family HMM PF00232.
  
   0.665
ABK75705.1
Para-nitrobenzyl esterase; Identified by match to protein family HMM PF00135; Belongs to the type-B carboxylesterase/lipase family.
  
    0.564
GlnQ
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
    0.537
ABK71661.1
Conserved hypothetical protein.
  
    0.528
ABK72437.1
Glutamine-binding periplasmic protein/glutamine transport system permease protein; Identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726.
  
    0.522
ABK75556.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
    0.503
clpP
Clp protease; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
  
  
 0.459
clpP-2
Clp protease; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
  
  
 0.459
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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