STRINGSTRING
ABK71644.1 ABK71644.1 ABK74740.1 ABK74740.1 ABK69789.1 ABK69789.1 ABK72195.1 ABK72195.1 PduC PduC ABK75675.1 ABK75675.1 ABK74550.1 ABK74550.1 ABK74269.1 ABK74269.1 ABK70278.1 ABK70278.1 ABK75170.1 ABK75170.1 ABK74671.1 ABK74671.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71644.1Diol dehydrase gamma subunit. (114 aa)    
Predicted Functional Partners:
ABK74740.1
Glycerol dehydratase large subunit; Identified by match to protein family HMM PF02286.
 
 0.998
ABK69789.1
Propanediol utilization: dehydratase, medium subunit; Identified by match to protein family HMM PF02288.
 
 0.996
ABK72195.1
Glycerol dehydratase large subunit; Identified by match to protein family HMM PF02286.
 
 0.994
PduC
Glycerol dehydratase large subunit; Identified by match to protein family HMM PF02286.
 
 0.994
ABK75675.1
Putative diol dehydratase reactivation protein.
 
  
 0.969
ABK74550.1
PduH protein.
 
  
 0.918
ABK74269.1
Coenzyme B12-dependent glycerol dehydrogenase small subunit; Identified by match to protein family HMM PF02287.
  
 
 
0.912
ABK70278.1
Coenzyme B12-dependent glycerol dehydrogenase small subunit.
  
 
 
0.911
ABK75170.1
PduO protein; Identified by match to protein family HMM PF03928.
 
  
 0.781
ABK74671.1
Conserved hypothetical protein; Identified by match to protein family HMM PF03928.
 
  
 0.780
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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