STRINGSTRING
ABK70497.1 ABK70497.1 tadA tadA ABK73781.1 ABK73781.1 ABK72696.1 ABK72696.1 ABK75690.1 ABK75690.1 ABK70804.1 ABK70804.1 ABK75490.1 ABK75490.1 ABK76005.1 ABK76005.1 ABK73069.1 ABK73069.1 ABK74693.1 ABK74693.1 ABK74620.1 ABK74620.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70497.1Conserved hypothetical protein. (168 aa)    
Predicted Functional Partners:
tadA
Cytidine and deoxycytidylate deaminase family protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
    0.896
ABK73781.1
Amino acid-binding ACT; Identified by match to protein family HMM PF01842.
  
     0.769
ABK72696.1
Conserved hypothetical protein.
  
     0.758
ABK75690.1
Conserved hypothetical protein.
  
    0.746
ABK70804.1
Conserved hypothetical protein.
  
     0.739
ABK75490.1
Conserved hypothetical protein.
  
     0.728
ABK76005.1
Conserved hypothetical protein.
  
    0.723
ABK73069.1
Integral membrane protein.
  
    0.718
ABK74693.1
Conserved hypothetical protein.
  
    0.717
ABK74620.1
Conserved hypothetical protein.
  
    0.712
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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