Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70037.1 | ABK70415.1 | MSMEG_6358 | MSMEG_6359 | Mesocentin. | Trypsin domain protein; Identified by match to protein family HMM PF00089. | 0.778 |
| ABK70037.1 | ABK75643.1 | MSMEG_6358 | MSMEG_6357 | Mesocentin. | Hypothetical protein; Identified by Glimmer2; putative. | 0.574 |
| ABK70415.1 | ABK70037.1 | MSMEG_6359 | MSMEG_6358 | Trypsin domain protein; Identified by match to protein family HMM PF00089. | Mesocentin. | 0.778 |
| ABK70415.1 | ABK71306.1 | MSMEG_6359 | MSMEG_2107 | Trypsin domain protein; Identified by match to protein family HMM PF00089. | Conserved hypothetical protein. | 0.423 |
| ABK70415.1 | ABK71831.1 | MSMEG_6359 | MSMEG_4360 | Trypsin domain protein; Identified by match to protein family HMM PF00089. | Conserved hypothetical protein. | 0.415 |
| ABK70415.1 | ABK72083.1 | MSMEG_6359 | MSMEG_5355 | Trypsin domain protein; Identified by match to protein family HMM PF00089. | Hypothetical protein; Identified by Glimmer2; putative. | 0.416 |
| ABK70415.1 | ABK72323.1 | MSMEG_6359 | MSMEG_6935 | Trypsin domain protein; Identified by match to protein family HMM PF00089. | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01471; match to protein family HMM PF01520. | 0.409 |
| ABK70415.1 | ABK72424.1 | MSMEG_6359 | MSMEG_4365 | Trypsin domain protein; Identified by match to protein family HMM PF00089. | Conserved hypothetical protein. | 0.415 |
| ABK70415.1 | ABK73111.1 | MSMEG_6359 | MSMEG_0693 | Trypsin domain protein; Identified by match to protein family HMM PF00089. | Conserved hypothetical protein. | 0.414 |
| ABK70415.1 | ABK75643.1 | MSMEG_6359 | MSMEG_6357 | Trypsin domain protein; Identified by match to protein family HMM PF00089. | Hypothetical protein; Identified by Glimmer2; putative. | 0.573 |
| ABK70415.1 | mfpA | MSMEG_6359 | MSMEG_1641 | Trypsin domain protein; Identified by match to protein family HMM PF00089. | Conserved hypothetical protein; When present on multicopy plasmids confers increased resistance to fluoroquinolone antibiotics such as ciprofloxacin and sparfloxacin but not the quinolone nalidixic acid. Forms a structure that exhibits size, shape and electrostatic similarity to B-form DNA; it may bind to DNA gyrase which is postulated to protect it from fluoroquinolones (By similarity). Belongs to the pentapeptide repeat protein family. | 0.416 |
| ABK70415.1 | saeB | MSMEG_6359 | MSMEG_0045 | Trypsin domain protein; Identified by match to protein family HMM PF00089. | Hypothetical protein; May be involved in assembly of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Involved in DNA conjugation in recipient (MDK8) but not donor (mc(2)155) strain. | 0.408 |
| ABK71306.1 | ABK70415.1 | MSMEG_2107 | MSMEG_6359 | Conserved hypothetical protein. | Trypsin domain protein; Identified by match to protein family HMM PF00089. | 0.423 |
| ABK71306.1 | ABK72083.1 | MSMEG_2107 | MSMEG_5355 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.421 |
| ABK71306.1 | ABK73111.1 | MSMEG_2107 | MSMEG_0693 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.416 |
| ABK71306.1 | mfpA | MSMEG_2107 | MSMEG_1641 | Conserved hypothetical protein. | Conserved hypothetical protein; When present on multicopy plasmids confers increased resistance to fluoroquinolone antibiotics such as ciprofloxacin and sparfloxacin but not the quinolone nalidixic acid. Forms a structure that exhibits size, shape and electrostatic similarity to B-form DNA; it may bind to DNA gyrase which is postulated to protect it from fluoroquinolones (By similarity). Belongs to the pentapeptide repeat protein family. | 0.422 |
| ABK71306.1 | saeB | MSMEG_2107 | MSMEG_0045 | Conserved hypothetical protein. | Hypothetical protein; May be involved in assembly of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Involved in DNA conjugation in recipient (MDK8) but not donor (mc(2)155) strain. | 0.413 |
| ABK71831.1 | ABK70415.1 | MSMEG_4360 | MSMEG_6359 | Conserved hypothetical protein. | Trypsin domain protein; Identified by match to protein family HMM PF00089. | 0.415 |
| ABK71831.1 | ABK72083.1 | MSMEG_4360 | MSMEG_5355 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.413 |
| ABK71831.1 | ABK73111.1 | MSMEG_4360 | MSMEG_0693 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.413 |
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