Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70818.1 | ABK72840.1 | MSMEG_4540 | MSMEG_6389 | Identified by match to protein family HMM PF00583. | Probable arabinosyltransferase A; Identified by match to protein family HMM PF04602. | 0.551 |
ABK70818.1 | ABK75466.1 | MSMEG_4540 | MSMEG_6390 | Identified by match to protein family HMM PF00583. | Transporter, major facilitator family protein; Identified by match to protein family HMM PF05977; match to protein family HMM PF07690. | 0.467 |
ABK71134.1 | ABK72840.1 | MSMEG_6388 | MSMEG_6389 | Probable arabinosyltransferase B; Identified by match to protein family HMM PF04602. | Probable arabinosyltransferase A; Identified by match to protein family HMM PF04602. | 0.999 |
ABK71134.1 | ABK75466.1 | MSMEG_6388 | MSMEG_6390 | Probable arabinosyltransferase B; Identified by match to protein family HMM PF04602. | Transporter, major facilitator family protein; Identified by match to protein family HMM PF05977; match to protein family HMM PF07690. | 0.485 |
ABK72840.1 | ABK70818.1 | MSMEG_6389 | MSMEG_4540 | Probable arabinosyltransferase A; Identified by match to protein family HMM PF04602. | Identified by match to protein family HMM PF00583. | 0.551 |
ABK72840.1 | ABK71134.1 | MSMEG_6389 | MSMEG_6388 | Probable arabinosyltransferase A; Identified by match to protein family HMM PF04602. | Probable arabinosyltransferase B; Identified by match to protein family HMM PF04602. | 0.999 |
ABK72840.1 | ABK75466.1 | MSMEG_6389 | MSMEG_6390 | Probable arabinosyltransferase A; Identified by match to protein family HMM PF04602. | Transporter, major facilitator family protein; Identified by match to protein family HMM PF05977; match to protein family HMM PF07690. | 0.491 |
ABK72840.1 | ABK75645.1 | MSMEG_6389 | MSMEG_3513 | Probable arabinosyltransferase A; Identified by match to protein family HMM PF04602. | Enhanced intracellular survival protein. | 0.551 |
ABK75466.1 | ABK70818.1 | MSMEG_6390 | MSMEG_4540 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF05977; match to protein family HMM PF07690. | Identified by match to protein family HMM PF00583. | 0.467 |
ABK75466.1 | ABK71134.1 | MSMEG_6390 | MSMEG_6388 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF05977; match to protein family HMM PF07690. | Probable arabinosyltransferase B; Identified by match to protein family HMM PF04602. | 0.485 |
ABK75466.1 | ABK72840.1 | MSMEG_6390 | MSMEG_6389 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF05977; match to protein family HMM PF07690. | Probable arabinosyltransferase A; Identified by match to protein family HMM PF04602. | 0.491 |
ABK75466.1 | ABK75645.1 | MSMEG_6390 | MSMEG_3513 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF05977; match to protein family HMM PF07690. | Enhanced intracellular survival protein. | 0.467 |
ABK75645.1 | ABK72840.1 | MSMEG_3513 | MSMEG_6389 | Enhanced intracellular survival protein. | Probable arabinosyltransferase A; Identified by match to protein family HMM PF04602. | 0.551 |
ABK75645.1 | ABK75466.1 | MSMEG_3513 | MSMEG_6390 | Enhanced intracellular survival protein. | Transporter, major facilitator family protein; Identified by match to protein family HMM PF05977; match to protein family HMM PF07690. | 0.467 |