Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70584.1 | ABK75413.1 | MSMEG_5638 | MSMEG_6406 | Metallo-beta-lactamase family protein. | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01510. | 0.591 |
ABK71514.1 | ABK72680.1 | MSMEG_6180 | MSMEG_5893 | Secreted protein. | Conserved hypothetical protein. | 0.662 |
ABK71514.1 | ABK74136.1 | MSMEG_6180 | MSMEG_6405 | Secreted protein. | Erp protein. | 0.479 |
ABK71514.1 | ABK75355.1 | MSMEG_6180 | MSMEG_5208 | Secreted protein. | Conserved hypothetical protein. | 0.518 |
ABK71514.1 | ABK75413.1 | MSMEG_6180 | MSMEG_6406 | Secreted protein. | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01510. | 0.543 |
ABK71514.1 | ABK75671.1 | MSMEG_6180 | MSMEG_6400 | Secreted protein. | Probable conserved transmembrane protein. | 0.760 |
ABK71860.1 | ABK72323.1 | MSMEG_6281 | MSMEG_6935 | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520. | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01471; match to protein family HMM PF01520. | 0.989 |
ABK71860.1 | ABK72792.1 | MSMEG_6281 | MSMEG_5315 | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520. | Gp35 protein; Identified by match to protein family HMM PF01471; match to protein family HMM PF01510. | 0.892 |
ABK71860.1 | ABK75413.1 | MSMEG_6281 | MSMEG_6406 | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520. | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01510. | 0.900 |
ABK72177.1 | ABK75413.1 | MSMEG_5447 | MSMEG_6406 | Dolichyl-phosphate-mannose-protein mannosyltransferase; Identified by match to protein family HMM PF02366. | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01510. | 0.786 |
ABK72323.1 | ABK71860.1 | MSMEG_6935 | MSMEG_6281 | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01471; match to protein family HMM PF01520. | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520. | 0.989 |
ABK72323.1 | ABK72792.1 | MSMEG_6935 | MSMEG_5315 | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01471; match to protein family HMM PF01520. | Gp35 protein; Identified by match to protein family HMM PF01471; match to protein family HMM PF01510. | 0.896 |
ABK72323.1 | ABK75413.1 | MSMEG_6935 | MSMEG_6406 | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01471; match to protein family HMM PF01520. | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01510. | 0.870 |
ABK72680.1 | ABK71514.1 | MSMEG_5893 | MSMEG_6180 | Conserved hypothetical protein. | Secreted protein. | 0.662 |
ABK72680.1 | ABK74136.1 | MSMEG_5893 | MSMEG_6405 | Conserved hypothetical protein. | Erp protein. | 0.685 |
ABK72680.1 | ABK75355.1 | MSMEG_5893 | MSMEG_5208 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.754 |
ABK72680.1 | ABK75413.1 | MSMEG_5893 | MSMEG_6406 | Conserved hypothetical protein. | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01510. | 0.631 |
ABK72792.1 | ABK71860.1 | MSMEG_5315 | MSMEG_6281 | Gp35 protein; Identified by match to protein family HMM PF01471; match to protein family HMM PF01510. | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520. | 0.892 |
ABK72792.1 | ABK72323.1 | MSMEG_5315 | MSMEG_6935 | Gp35 protein; Identified by match to protein family HMM PF01471; match to protein family HMM PF01510. | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01471; match to protein family HMM PF01520. | 0.896 |
ABK72792.1 | ABK75413.1 | MSMEG_5315 | MSMEG_6406 | Gp35 protein; Identified by match to protein family HMM PF01471; match to protein family HMM PF01510. | N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01510. | 0.906 |
page 1 of 2