STRINGSTRING
ABK75413.1 ABK75413.1 ABK72792.1 ABK72792.1 ABK71860.1 ABK71860.1 ABK72323.1 ABK72323.1 ABK72177.1 ABK72177.1 ABK74136.1 ABK74136.1 ABK72680.1 ABK72680.1 ABK75671.1 ABK75671.1 ABK70584.1 ABK70584.1 ABK75355.1 ABK75355.1 ABK71514.1 ABK71514.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK75413.1N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01510. (536 aa)    
Predicted Functional Partners:
ABK72792.1
Gp35 protein; Identified by match to protein family HMM PF01471; match to protein family HMM PF01510.
  
  
 0.906
ABK71860.1
N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520.
  
  
 0.900
ABK72323.1
N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01471; match to protein family HMM PF01520.
  
  
 0.870
ABK72177.1
Dolichyl-phosphate-mannose-protein mannosyltransferase; Identified by match to protein family HMM PF02366.
   
  
 0.786
ABK74136.1
Erp protein.
 
  
 0.732
ABK72680.1
Conserved hypothetical protein.
 
 0.631
ABK75671.1
Probable conserved transmembrane protein.
 
  
 0.592
ABK70584.1
Metallo-beta-lactamase family protein.
   
  
 0.591
ABK75355.1
Conserved hypothetical protein.
 
 0.578
ABK71514.1
Secreted protein.
  
    0.543
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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