Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70002.1 | ABK70964.1 | MSMEG_6407 | MSMEG_6411 | Cof-like hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. | Conserved hypothetical protein. | 0.552 |
ABK70002.1 | ABK72672.1 | MSMEG_6407 | MSMEG_6408 | Cof-like hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. | Identified by match to protein family HMM PF01553. | 0.837 |
ABK70002.1 | ABK75275.1 | MSMEG_6407 | MSMEG_6409 | Cof-like hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. | Identified by match to protein family HMM PF01553. | 0.837 |
ABK70002.1 | ABK76191.1 | MSMEG_6407 | MSMEG_6410 | Cof-like hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. | Identified by match to protein family HMM PF00355. | 0.649 |
ABK70964.1 | ABK70002.1 | MSMEG_6411 | MSMEG_6407 | Conserved hypothetical protein. | Cof-like hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. | 0.552 |
ABK70964.1 | ABK72672.1 | MSMEG_6411 | MSMEG_6408 | Conserved hypothetical protein. | Identified by match to protein family HMM PF01553. | 0.573 |
ABK70964.1 | ABK75275.1 | MSMEG_6411 | MSMEG_6409 | Conserved hypothetical protein. | Identified by match to protein family HMM PF01553. | 0.584 |
ABK70964.1 | ABK76191.1 | MSMEG_6411 | MSMEG_6410 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00355. | 0.974 |
ABK72672.1 | ABK70002.1 | MSMEG_6408 | MSMEG_6407 | Identified by match to protein family HMM PF01553. | Cof-like hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. | 0.837 |
ABK72672.1 | ABK70964.1 | MSMEG_6408 | MSMEG_6411 | Identified by match to protein family HMM PF01553. | Conserved hypothetical protein. | 0.573 |
ABK72672.1 | ABK75275.1 | MSMEG_6408 | MSMEG_6409 | Identified by match to protein family HMM PF01553. | Identified by match to protein family HMM PF01553. | 0.894 |
ABK72672.1 | ABK76191.1 | MSMEG_6408 | MSMEG_6410 | Identified by match to protein family HMM PF01553. | Identified by match to protein family HMM PF00355. | 0.642 |
ABK75275.1 | ABK70002.1 | MSMEG_6409 | MSMEG_6407 | Identified by match to protein family HMM PF01553. | Cof-like hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. | 0.837 |
ABK75275.1 | ABK70964.1 | MSMEG_6409 | MSMEG_6411 | Identified by match to protein family HMM PF01553. | Conserved hypothetical protein. | 0.584 |
ABK75275.1 | ABK72672.1 | MSMEG_6409 | MSMEG_6408 | Identified by match to protein family HMM PF01553. | Identified by match to protein family HMM PF01553. | 0.894 |
ABK75275.1 | ABK76191.1 | MSMEG_6409 | MSMEG_6410 | Identified by match to protein family HMM PF01553. | Identified by match to protein family HMM PF00355. | 0.664 |
ABK76191.1 | ABK70002.1 | MSMEG_6410 | MSMEG_6407 | Identified by match to protein family HMM PF00355. | Cof-like hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. | 0.649 |
ABK76191.1 | ABK70964.1 | MSMEG_6410 | MSMEG_6411 | Identified by match to protein family HMM PF00355. | Conserved hypothetical protein. | 0.974 |
ABK76191.1 | ABK72672.1 | MSMEG_6410 | MSMEG_6408 | Identified by match to protein family HMM PF00355. | Identified by match to protein family HMM PF01553. | 0.642 |
ABK76191.1 | ABK75275.1 | MSMEG_6410 | MSMEG_6409 | Identified by match to protein family HMM PF00355. | Identified by match to protein family HMM PF01553. | 0.664 |