STRINGSTRING
ABK75508.1 ABK75508.1 ABK71698.1 ABK71698.1 ABK76213.1 ABK76213.1 ABK75348.1 ABK75348.1 ABK73659.1 ABK73659.1 pheA pheA ABK72295.1 ABK72295.1 ABK73229.1 ABK73229.1 ABK74597.1 ABK74597.1 ABK74954.1 ABK74954.1 ABK74484.1 ABK74484.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK75508.1Abortive infection protein; Identified by match to protein family HMM PF02517. (260 aa)    
Predicted Functional Partners:
ABK71698.1
Conserved hypothetical protein.
  
    0.740
ABK76213.1
Identified by match to protein family HMM PF03734.
  
  
 0.725
ABK75348.1
Identified by match to protein family HMM PF03734.
  
  
 0.676
ABK73659.1
Identified by match to protein family HMM PF03734.
  
  
 0.660
pheA
Prephenate dehydratase; Identified by match to protein family HMM PF00800; match to protein family HMM PF01842.
  
    0.596
ABK72295.1
Identified by match to protein family HMM PF03734.
     
 0.593
ABK73229.1
Identified by match to protein family HMM PF00300; Belongs to the phosphoglycerate mutase family.
  
    0.544
ABK74597.1
Transcriptional regulator; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350.
  
    0.530
ABK74954.1
ABC-type transporter, permease components; Identified by match to protein family HMM PF05425.
 
    0.524
ABK74484.1
ATP-dependent DNA helicase; Identified by match to protein family HMM PF00580; Belongs to the helicase family. UvrD subfamily.
 
    0.514
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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