STRINGSTRING
ABK74211.1 ABK74211.1 eutB eutB eutC eutC ABK71262.1 ABK71262.1 ABK76104.1 ABK76104.1 ABK70819.1 ABK70819.1 ABK74627.1 ABK74627.1 ABK70632.1 ABK70632.1 pstA pstA ABK72038.1 ABK72038.1 ABK70000.1 ABK70000.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74211.1Glycerophosphoryl diester phosphodiesterase family protein; Identified by match to protein family HMM PF03009. (281 aa)    
Predicted Functional Partners:
eutB
Ethanolamine ammonia-lyase, large subunit; Identified by match to protein family HMM PF06751.
  
 
  0.901
eutC
Ethanolamine ammonia-lyase, light chain; Identified by match to protein family HMM PF05985; Belongs to the EutC family.
  
 
  0.901
ABK71262.1
Probable conserved transmembrane protein.
  
    0.803
ABK76104.1
Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.
 
  
 0.776
ABK70819.1
Glycerol-3-phosphate dehydrogenase 2; Identified by match to protein family HMM PF01266; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.753
ABK74627.1
Glycerol-3-phosphate dehydrogenase 2; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.753
ABK70632.1
Glycerol-3-phosphate dehydrogenase 1; Identified by match to protein family HMM PF01266; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.751
pstA
Phosphate ABC transporter, permease protein PstA; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974.
  
  
 0.634
ABK72038.1
Glycerol uptake facilitator, MIP channel; Identified by match to protein family HMM PF00230; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.585
ABK70000.1
Aquaporin Z; Identified by match to protein family HMM PF00230; match to protein family HMM TIGR00861; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.585
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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